| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6046 |
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| Symbol | rplB |
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| ID | 5674367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7359377 |
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| End bp | 7360210 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244894 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001510296 |
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| Protein GI | 158317788 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.966383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.220559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTC GTAGGTACAA GCCGACGACG CCGGGGCGTC GTGGCTCGAG CGTCGCGGAC
TTCGTCGAGA TCACGCGTGA TCACCCGGAG AAGTCGCTCG TCCGCCCGCT GCACTCCAAG
GGCGGCCGCA ACGTCCACGG GCGGATCACG ACCCGGCACC AGGGCGGCGG TCACAAGCGC
GCCTACCGGA TCATCGACTT CCGGCGGGAC AAGGACGGCG TGCCGGCCAA GGTCGCGCAC
ATCGAGTACG ACCCGAACCG CACCGCGCGG ATCGCCCTGC TGCACTACGT CGACGGCGAG
AAGCGCTACA TCCTCGCCCC GGTGAAGCTG CACCAGGGCG ACATGGTCAG CTCGGGTGTC
GGCGCGGACA TCAAGCCGGG CAACGCCCTG CCGCTGCGCA ACATCCCGAC CGGCACCGTG
GTGCACGCCA TCGAGCTGCG TCCCGGCGGC GGCGCCAAGA TCGCCCGCAG CGCCGGCGCC
AGTGTGCAGC TCGTCGCGAA GGACGGCCCG TACGCCCAGC TCCGGATGCC CTCCGGTGAG
ATCCGCAACG TCGACGTGCG CTGCCGCGCC ACCGTCGGCG AGGTCGGCAA CGCCGAGCAG
AGCAACATCA ACTGGGGCAA GGCCGGCCGC ATGCGCTGGA AGGGCCGTCG GCCCACCGTG
CGTGGTGTCG CGATGAACCC GGTCGACCAC CCGCACGGTG GTGGTGAGGG CAAGACCTCC
GGTGGCCGCC ACCCGGTCAA CCCGAAGGGC CGTCCGGAGG GCCGCACCCG CCGCACCAAG
AAGTCCAGCG ACGCGCTGAT CGTCCGGCGC CGCAAGCAGA ACAGGCGGCG CTAG
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| Protein sequence | MGIRRYKPTT PGRRGSSVAD FVEITRDHPE KSLVRPLHSK GGRNVHGRIT TRHQGGGHKR
AYRIIDFRRD KDGVPAKVAH IEYDPNRTAR IALLHYVDGE KRYILAPVKL HQGDMVSSGV
GADIKPGNAL PLRNIPTGTV VHAIELRPGG GAKIARSAGA SVQLVAKDGP YAQLRMPSGE
IRNVDVRCRA TVGEVGNAEQ SNINWGKAGR MRWKGRRPTV RGVAMNPVDH PHGGGEGKTS
GGRHPVNPKG RPEGRTRRTK KSSDALIVRR RKQNRRR
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