| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6043 |
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| Symbol | rpsC |
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| ID | 5674364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7357628 |
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| End bp | 7358605 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244891 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001510293 |
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| Protein GI | 158317785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.80949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.136813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCAGA AGGTAAACCC GCACGGGTTC CGACTTGGCA TCACGTCGGA GTTCACCTCC
CGCTGGTACG CCGACAAGCA GTACAAGGCG TACGTCGGTG AGGACGTCAA GATCCGCAAG
ATGATGTCCA AGGGCATGGA GCGGGCAGGC ATCAGCCGGG TCGACATCGA GCGCACCCAG
GGCCGGCTGC GGGTGGACAT CCACACCGCC CGCCCGGGCA TCGTGATCGG CCGGCGTGGC
GCCGAAGCCG ACCGCATCCG CGGTGACCTC GAGAAGCTGA CCGGCAAGCA GGTGCAGCTC
AACATCCTCG AGGTGAAGAA CCCCGAGATC GACGCGCAGC TCGTGGCACA GGGCGTCGCC
GAGCAGCTCT CCAGCCGGGT CAGCTTCCGC CGCGCGATGC GTAAGGCGAT GCAGTCCGCG
ATGAAGAGCG GCGCCAAGGG AATCCGGGTC CAGTGCTCGG GCCGCCTCGG CGGCGCCGAG
ATGAGCCGGT CGGAGTTCTA CCGCGAGGGC CGGGTGCCGC TGCACACGCT GCGCGCGGAC
ATCGACTACG GCTTCTACGA GGCCCGGACG AACTTCGGCC GGATCGGCGT GAAGGTCTGG
ATCTACAAGG GCGACATCGT CCAGAGCCGC GCGGAGCGGG AGGCCCAGGA GGCCCTGCTG
CGTCAGCAGC GCCGGGAGCG CCCGCGCCGC GGGCCGCGCT CGGGCTCGTC CGGCACCACG
CAGGGCGGGA CGGACGCCGG TCGGGCCGCG GCCCGCGCTG GCGACCGCCG CGGCCGTGGT
GGCAGCGGTG GCGGTGGCGG CTCGGCGGAG AAGGCTTCCG CCGCCGAGAA GGCCCCGGCG
GAGAAGCCGG CGACCGAGTC GGCCGCGGTC GAGGGCACGC CGGTGGAGAC CCCGGCGGTC
ACGCCTGAGA CCACCGCGGC CCCGGCCGCA GTGACGACCG CCGAGGCCCA GGGCGCGCCG
GAGAAGGCGG AGGGTTAG
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| Protein sequence | MGQKVNPHGF RLGITSEFTS RWYADKQYKA YVGEDVKIRK MMSKGMERAG ISRVDIERTQ
GRLRVDIHTA RPGIVIGRRG AEADRIRGDL EKLTGKQVQL NILEVKNPEI DAQLVAQGVA
EQLSSRVSFR RAMRKAMQSA MKSGAKGIRV QCSGRLGGAE MSRSEFYREG RVPLHTLRAD
IDYGFYEART NFGRIGVKVW IYKGDIVQSR AEREAQEALL RQQRRERPRR GPRSGSSGTT
QGGTDAGRAA ARAGDRRGRG GSGGGGGSAE KASAAEKAPA EKPATESAAV EGTPVETPAV
TPETTAAPAA VTTAEAQGAP EKAEG
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