| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6038 |
|---|
| Symbol | rplX |
|---|
| ID | 5674359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7355770 |
|---|
| End bp | 7356096 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641244886 |
|---|
| Product | 50S ribosomal protein L24 |
|---|
| Protein accession | YP_001510288 |
|---|
| Protein GI | 158317780 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0198] Ribosomal protein L24 |
|---|
| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.128427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGTA TGAAGATCAA GAAGGGTGAC ACGGTCCAGA TCGTCACGGG CAAGGACCGC
GGCCTGAAGG GCAAGGTCAT CCGGGCCATC CCCGACCAGA ACAAGGTCGT GGTCGAGGGC
GCCAACCGGG TCACCCGGCA CACCCGCGTC CAGCAGAGCT CGCGTGGATC GCAGTCCGGC
GGGATCGTCA CCCAGGAGGC GCCGATCCAC GTCAGCAACG TGATGATCGT CGACCCGTCC
GACGGCCGTC CGACCCGCGT CGGTTACCGC TTCAACGACG ACGGCACCAA GGTCCGGATC
TCGCGCCGCA CCGGTGCCGA GCTCTAG
|
|---|
| Protein sequence | MAGMKIKKGD TVQIVTGKDR GLKGKVIRAI PDQNKVVVEG ANRVTRHTRV QQSSRGSQSG
GIVTQEAPIH VSNVMIVDPS DGRPTRVGYR FNDDGTKVRI SRRTGAEL
|
|---|
| |