| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6029 |
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| Symbol | secY |
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| ID | 5674350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7350558 |
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| End bp | 7351850 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641244877 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001510279 |
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| Protein GI | 158317771 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.175346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCACCG CCTTCACGCG GGCCTTCCGC ACGCCCGACC TGCGGAAGAA ACTGCTCTTC
ACCCTCGGCG TCGTCGTCCT GTTCCGGTTC GGCAGCGTCA TGCCGTCGCC CGGCGTCTCC
ACGGCGGCGG TGAACGCGTG TCTGGACTCG GCCAGCGCCG AAAGCAACAA CGTGTACTCG
CTGATCAACC TCTTCAGCGG TGGCGCTCTC CTTCAGCTCT CGGTGTTCGC GCTCGGCATC
ATGCCGTACA TCACCTCCAG CATCATCATC CAGCTTCTGG TGGTGGTGAT TCCGCGGCTC
GAGCAGCTCA AGAAGGAAGG CAGCTCGGGT GAGCAGAAGC TCACCCAGTA CACCCGTTAC
CTGACGGTCG CCCTGGGCAT CCTCCAGGCC ACCGGCATCG TGGCGCTCGC CCGCAGCGGC
CGGCTCTTCC CTGGCTGCAG CGCCCAGATC ATCCCGGACA CGAGCCTCTT CCGCATCGTC
ACCATCGTGA TCACTATGAC CGCTGGAACC GCGGTCATCA TGTGGATGGG TGAGCTGATC
ACCGCCCGCG GCGTGGGCAA CGGCATGTCC CTGCTGATCT TCACCTCGAT CGCGGCGGCC
CTGCCCTCCC AGGGCGGACG GATCCTCCAG GTCGCCGGTG GCGTCGTGTT CGGTCTCGTG
ATCCTGCTCG GTCTGGCCAT CGTCGTGTTC GTAGTGTTCG TCGAACAGTC GCAGCGCCGC
ATCCCGGTGC AGTACGCGAA GCGGCTGATC GGGCGCCGGA TGTATGGCGG AACGTCGACC
TACCTCCCGA TCAAGGTGAA CCAGGCCGGC ATCATCCCGG TCATCTTCGC CTCCTCGCTG
CTCCAGCTCC CACAGCTCGT GGGCCAGGTG TGGAGCAACC AGACCTTCCA GGACTTCGAG
CAGCGCTACC TGTCGCGCGG GGACCACCCG CTCTACCTCG TGGCCTACGG TGCGCTGATC
ATCTTCTTCA CGTACTTCTA TGTCGCGATC ACCTTCAACC CGACGGAGGT CGCCGACAAC
ATGAGGAAGT ACGGCGGGTT CATCCCCGGG ATCCGACCCG GCCGGCCCAC GGCCGAATAC
CTGGATCACG TGCTGTCCCG CATCACCCTC CCTGGCTCGC TGTTCCTGGG GGTCATCACG
GTGTTGCCGT TGGCGCTTCT CAACCTGACG AAGGACCAGC CCTTCCCGTT TGCTGGTACC
TCGGTTCTGA TCATGGTGGG AGTGGGGCTG GAGACCGTGA AACAGATTGA AAGCCAGCTC
ATGCTGCGCA ACTACGAAGG ATTCCTCCGG TAG
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| Protein sequence | MLTAFTRAFR TPDLRKKLLF TLGVVVLFRF GSVMPSPGVS TAAVNACLDS ASAESNNVYS
LINLFSGGAL LQLSVFALGI MPYITSSIII QLLVVVIPRL EQLKKEGSSG EQKLTQYTRY
LTVALGILQA TGIVALARSG RLFPGCSAQI IPDTSLFRIV TIVITMTAGT AVIMWMGELI
TARGVGNGMS LLIFTSIAAA LPSQGGRILQ VAGGVVFGLV ILLGLAIVVF VVFVEQSQRR
IPVQYAKRLI GRRMYGGTST YLPIKVNQAG IIPVIFASSL LQLPQLVGQV WSNQTFQDFE
QRYLSRGDHP LYLVAYGALI IFFTYFYVAI TFNPTEVADN MRKYGGFIPG IRPGRPTAEY
LDHVLSRITL PGSLFLGVIT VLPLALLNLT KDQPFPFAGT SVLIMVGVGL ETVKQIESQL
MLRNYEGFLR
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