| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6024 |
|---|
| Symbol | |
|---|
| ID | 5674345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7346815 |
|---|
| End bp | 7347219 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641244872 |
|---|
| Product | 30S ribosomal protein S11 |
|---|
| Protein accession | YP_001510274 |
|---|
| Protein GI | 158317766 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.170324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCCA AGACACGCGC CGCCGGCGTC AAGAAGGTCC GGCGGAAAGA AAAGAAGAAC
GTCGCCCACG GGCACGCTCA CATCAAGAGC ACGTTCAACA ACACGATCGT CTCGATCACC
GACCCCAGTG GGAACGTGAT CTCGTGGGCG TCGGCCGGCC ACGTCGGCTT CAAGGGCTCC
CGCAAGTCCA CCCCGTTCGC CGCGCAGATG GCCGCCGAGA ACGCGGCCCG CAAGGCGCAG
GAGCACGGGA TGCGCAAGGT CGACGTCTTC GTCAAGGGTC CCGGCTCCGG CCGGGAGACG
GCGATCCGCT CGCTGCAGGC CGCCGGCCTG GAGGTCGGGG CGATCCAGGA CGTCACCCCC
ACCCCGCACA ACGGCTGCCG CCCGCCGAAG CGTCGCCGGG TCTGA
|
|---|
| Protein sequence | MPPKTRAAGV KKVRRKEKKN VAHGHAHIKS TFNNTIVSIT DPSGNVISWA SAGHVGFKGS
RKSTPFAAQM AAENAARKAQ EHGMRKVDVF VKGPGSGRET AIRSLQAAGL EVGAIQDVTP
TPHNGCRPPK RRRV
|
|---|
| |