| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6022 |
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| Symbol | |
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| ID | 5674343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7344818 |
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| End bp | 7345945 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244870 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001510272 |
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| Protein GI | 158317764 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.336367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCCGT GCCGGCTCCT CTTCAGGGGC TTCCACGGCG TCATATGGCG GTCGCCGTGT
TCGGAAGGAA GTTCTCTCAT GCTGATCGCT CAGCGTCCCT CGCTCGCCGA GGACCCGATC
TCCGAGTTCC GGTCGCGCTT CGTGATCGAG CCGCTCGAGC CGGGCTTCGG CTACACCCTC
GGCAACTCGC TGCGCCGCAC CCTGCTGTCC TCCATCCCGG GCGCGGCCGT GACGAGTATC
CGGGTGGACG GCGTCCTCCA CGAGTTCTCC ACCGTTCCCG GGGTCAAGGA GGACGTGACC
GACCTGATCC TGAACCTCAA GGAACTGGTC GTCAGCTCCG ACAACGACGA GCCGACCGTG
ATGTACCTGC GCAAGCAGGG CCCCGGTGAG GTCACCGCGG CCGACATCGC CCCCCCGGCC
GGCGTCGAGG TGCACAACCC CGACCTGCAC CTGGCCACCC TCAACGACAA GGGCAAGCTC
GAGATCGAGC TGACCGTCGA GCGGGGCCGT GGCTATGTCA GCGCCGCCCA GAACAAGCAG
CCGGGCCAGG AGATCGGTCG CATTCCGATC GACTCCATCT ACTCCCCGGT GCTGAAGGTC
ACCTACAAGG TCGAGGCGAC CCGTGTGGAG CAGCGCACGG ACTTCGACCG GCTCATCGTC
GACGTGGAGA CGAAGCAGTC GATCTCCCCA CGGGACGCGA TGGCCAGCGC CGGCAAGACC
CTCGTCGGCC TGTTCGGGCT GGCCCAGGAG CTCAACGCCG AGGCGGAGGG CGTCGACATC
GGCCCGTCCG CGGCGGACGC TGCCCTGGCC GCCGACCTGG CGCTGCCGAT CGAGGAGATG
GACCTGACCG TCCGCTCGTA CAACTGCCTC AAGCGCGAGG GCATCCACAC CATCGGTGAG
CTGGTGTCCC GCAGCGAGGC GGACCTGCTC GACATCCGCA ACTTCGGGCA GAAGTCGATC
GACGAGGTCA AGACCAAGCT GGGTGCCATG GGCCTGCAGC TCAAGGACTC CCCGCCCGGG
TTCGACCCGC GCCAGGCCGT CGACACGTAC GGCACCGACA CGTACAACCC GTCGTTCTCC
GACCCGTCCG ATGACGGTCG CGAGTTCGTC GAGACCGAAC AGTACTGA
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| Protein sequence | MPPCRLLFRG FHGVIWRSPC SEGSSLMLIA QRPSLAEDPI SEFRSRFVIE PLEPGFGYTL
GNSLRRTLLS SIPGAAVTSI RVDGVLHEFS TVPGVKEDVT DLILNLKELV VSSDNDEPTV
MYLRKQGPGE VTAADIAPPA GVEVHNPDLH LATLNDKGKL EIELTVERGR GYVSAAQNKQ
PGQEIGRIPI DSIYSPVLKV TYKVEATRVE QRTDFDRLIV DVETKQSISP RDAMASAGKT
LVGLFGLAQE LNAEAEGVDI GPSAADAALA ADLALPIEEM DLTVRSYNCL KREGIHTIGE
LVSRSEADLL DIRNFGQKSI DEVKTKLGAM GLQLKDSPPG FDPRQAVDTY GTDTYNPSFS
DPSDDGREFV ETEQY
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