Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6011 |
Symbol | |
ID | 5674332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7331207 |
End bp | 7332349 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244859 |
Product | alanine racemase |
Protein accession | YP_001510261 |
Protein GI | 158317753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0222771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.167789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCGC CGCCCCCATC GCACCTGCCG CGTGCCTACG CGGCCATCGA GCTCGACGCC GTGCGCGACT CTGTCGCGGC CCTGGTCGCC CGCGCCGGCG CCGCCGCGAC CATGGCCGTG GTCAAGGCGG ACGGGTACGG GCACGGAATG CTGCCCTGCG CCCGGGCCGC CCTGGACGCC GGCGCGAGCT GGCTCGGGAC GGCCTTCCTG GAGGAGGCGC TGGCACTGCG GGCCGCCGGG ATCACCGTCC CGGTGCTCTC CTGGCTGGCG GCGCCGGGTG AGCGCCTCGC CGCAGGCATC GCGGCGGATG TCGACCTCTC CGCGTCCGCC GGCTGGGCGC TCGACGACCT CGCCGCCGCG GCCCGCACCG CCGGCCGGGC CGCCCGGGTG CACCTAAAGA TCGACACTGG CCTCGGGCGG GCCGGGGCCA CCGGCGAGGA CTGGCCCGGC CTGTGCGACA GCGCCGCGGC GCTCGAGGCG GACGGGCTCA TCGAGGTCGT GGGCGTGTGG AGCCACTTCG CCTTCGCCGA CGCGCCCGGC CACCCGACCG TCCAGGCGCA GATCAGCCGG TTCGGTGACG CGGTGGACGT CGCCCGCAAG GCCGGGCTGC GCCCGCAGGT GCGCCACCTC GCGAACTCGG CCGCGACGCT GGTCAGCCCG GAGGCGCACT TCGACATGGT CCGGCCGGGC GTGTCGGTGT ACGGGCTGTC GCCGGGGCCC GAGGTCGGGC CGCCGTCCGC GTTCGGGCTG CGGCCCGCGA TGACGCTGCG CGCCAGCATC GCGCTGGTGA AGCGGGTGCC GGCGGGCACC GGAGTGTCCT ACGCGCACCG CTACCGGACG TCGGCGGAGA CCGGCCTCGC CGTCGTCCCG CTCGGCTACG CCGACGGCAT CCCCCGCTCG GCCACGAACA CGGCCGAGGT GCTCGTGGGC GGACGCCGGC GGCGCATCGC CGGCACCGTC TGCATGGACC AGTTCGTCAT GGACGTCGGT GCCGACCCGG TGCGCGTAGG CGACGAGGTG ATCCTCTTCG GCCCCGGCGA CCGGGGCGAG CCGACCGCGG ACGACTGGGC GCGCGCGCTC GGCACCATCA ACTACGAGAT CGTCACCCGG ATCGGCCCGC GGGTACCGCG CGTCTACATC TGA
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Protein sequence | MSPPPPSHLP RAYAAIELDA VRDSVAALVA RAGAAATMAV VKADGYGHGM LPCARAALDA GASWLGTAFL EEALALRAAG ITVPVLSWLA APGERLAAGI AADVDLSASA GWALDDLAAA ARTAGRAARV HLKIDTGLGR AGATGEDWPG LCDSAAALEA DGLIEVVGVW SHFAFADAPG HPTVQAQISR FGDAVDVARK AGLRPQVRHL ANSAATLVSP EAHFDMVRPG VSVYGLSPGP EVGPPSAFGL RPAMTLRASI ALVKRVPAGT GVSYAHRYRT SAETGLAVVP LGYADGIPRS ATNTAEVLVG GRRRRIAGTV CMDQFVMDVG ADPVRVGDEV ILFGPGDRGE PTADDWARAL GTINYEIVTR IGPRVPRVYI
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