Gene Franean1_5981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5981 
Symbol 
ID5674302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7288036 
End bp7289820 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content78% 
IMG OID641244829 
Productserine/threonine protein kinase 
Protein accessionYP_001510231 
Protein GI158317723 
COG category[K] Transcription
[T] Signal transduction mechanisms
[R] General function prediction only
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.381836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.162959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAC CGCTGACGGA CGACGACCCG AGGCAGGTCG GCCGGTACCG GCTCCACAAC 
CGGATCGGTG CCGGCGGGAT GGGCACCGTC TACCTCGGCT TCACCCCTGG CTCCGAACCG
GTCGCGGTGA AGGTGGCCGC CGCCGAGCTG TCCGAGGACG ACGAGTTCCG GTCCCGCTTC
GAGCGCGAGG TCCGGGCCGC GCTGCGGGTC CGGGGCGGTG CCGTGGCCAG CGTGCTGGAC
GCGGACACGA GCGCCGCCCA GCCGTGGATG GTGACCGAGT ACGTCGAGGG CGTCAGCCTG
GCCGACGCCG TCCGCCGCCG GGGGCGGCTG GAGGCGCACC TCGTGCGCGG GCTGGCTGTC
GGCCTCGCCG ACGCGCTGGT CGCGATCCAC GCGGCGGGCG TCGTCCATCG CGACCTGAAG
CCGTCGAACA TCCTGCTCGC CTGGGACGGC CCCAAGGTCA TCGACTTCGG CATCGCGCAG
CTCACCGACA GCGCCACCCT GACCAGGACC GGTCATGTCA TCGGCACCCT GGCGTGGATG
GCGCCGGAGC AGATGCGTGG CGAACCGGCC GGCACCGCGG CGGACGTCTT CGCCTGGGCG
AGCTGCGTCA CCTACGCCAC GACCGGTCGC CACCCGTTCC ACGCCGAGGC CCCCGACCTG
CTGGCGCAGC GCGTCCAGCG CGACGAGCCC GACCTCGACG CGGTTCCGCC CTACCTGCGC
GGCCTGGTCG GCCAGGCGCT GGCCAAGGCA CCGCGCGAGC GACCGGGGGC GTCCGGCCTG
CTGGCCGCGC TCGTCGGGCA TGAGGTACAC GGCGTCACCG ACGCCGACGC GGCCGCGGGG
TCCGTCCTCG AGCAGACCTG GACGGGGCCG TCGCCGGCGT TCGGCACGCC GCCGGCCGTG
GCCGCGCGCC CTCCCGCCCG GCCGGCTTCG AGTGGGCCGT CGCGTTACAG CCCGTCCGGA
TGGGCCAACT CGCCGGGGCC CGCCTGGCTG CCGGGGGTCT CTCCGGCGCC GGGACCGCCC
GCGGCGCCCA CCCCGTCGTC GACGCCCGGG TCGTCGTCGG CACCGGGGCC GTCGTTGCCG
TCGCCACCCA CTGCGTCGGG CCCGCTGGGT CCACCGCCGC CGGCCTCGGC GTTCCGCGCG
ACCTCCGGTC CCGGTCTCGC GCGGCGTGGC CCGGGCGGCC CCGGCGGCGA ATCCACGTAC
CGCCCGGCTG ACCCGATGCC GCCGGCCGCT CCGCCCGACC CGCGATCGTG GCCGGCGCGG
GGAGCGGCGG CGTCCGGGCG GCCGGCGGCC GGCGCTGATC CGGCGCAGCC GCCCTACCAG
CCCGGACGTA CCTCCGCGGG GCCGGCGCCG TTCCCGGTAC CGAGCGGGTA CGCCCAGGCG
CGGCCGGGCG GGCCCGTCGC GCCCGCGGCC GTGCCGGAGG CGCCCGCCGG GTACCCGCCG
CCCGTCGGGC CGGCCGGGCA CCACGGGCCG GCGGGACAGC CGGGAGCCGA GGCGGCCCGG
CCGCCGGCCC CCGGCGGCCG CGCGTCGCCC GCCCGCCGCG CCGGTCAGGG CCCTGGGCCC
TTCGAGCGGT GGAACACCTG CGCGCTGCTG TCGCTGGCCC TGGGCATCCT GTGGATCTTT
GGTCTCGGCA GCGTCGCGGC GGTGGCGCTG GGCCATGTCG GGCGGCTGCA GATCCGGCGC
CGGGGCCAGC GGGGCTCGCT CGCCGCGACG GTGGGCATCG GCCTGGGGTG GCTCGGCATC
GCCACGACCG CGGTGATCGC GGCCCTGGTG CGGCTCATTC TCTGA
 
Protein sequence
MLTPLTDDDP RQVGRYRLHN RIGAGGMGTV YLGFTPGSEP VAVKVAAAEL SEDDEFRSRF 
EREVRAALRV RGGAVASVLD ADTSAAQPWM VTEYVEGVSL ADAVRRRGRL EAHLVRGLAV
GLADALVAIH AAGVVHRDLK PSNILLAWDG PKVIDFGIAQ LTDSATLTRT GHVIGTLAWM
APEQMRGEPA GTAADVFAWA SCVTYATTGR HPFHAEAPDL LAQRVQRDEP DLDAVPPYLR
GLVGQALAKA PRERPGASGL LAALVGHEVH GVTDADAAAG SVLEQTWTGP SPAFGTPPAV
AARPPARPAS SGPSRYSPSG WANSPGPAWL PGVSPAPGPP AAPTPSSTPG SSSAPGPSLP
SPPTASGPLG PPPPASAFRA TSGPGLARRG PGGPGGESTY RPADPMPPAA PPDPRSWPAR
GAAASGRPAA GADPAQPPYQ PGRTSAGPAP FPVPSGYAQA RPGGPVAPAA VPEAPAGYPP
PVGPAGHHGP AGQPGAEAAR PPAPGGRASP ARRAGQGPGP FERWNTCALL SLALGILWIF
GLGSVAAVAL GHVGRLQIRR RGQRGSLAAT VGIGLGWLGI ATTAVIAALV RLIL