Gene Franean1_5962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5962 
Symbol 
ID5674283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7264559 
End bp7265656 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content75% 
IMG OID641244810 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001510212 
Protein GI158317704 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.323555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCG TGTTCGGGTC GCCGGGTCGA TACGTCCAGG GTCGGGATGC CACCGCCGCG 
CTCGGGCCGG AGATGGCCCG CCTCGGCCTG ACCGGCCCGG CGGTCATCGT GACGAGCGGG
GCCCCGCTGC GCCTGCTCGA GGACACCTGG CGGACGAGCC TGGACGGCGC GGGCATCCCC
TACTCCGTGC ACCTGTTCGG CGGCGAGTGC AGCGACCAGG AGATCGACCG GGTCGTCTCG
GCGGCGCGTG ACCCGGAGGC GACGGTGATC GTCGGTGCCG GTGGCGGGAA GGTGCTCGAC
ACCGCCCGCG CGGCGGCCGC CGCGCTCGAC CTGCCGGTGG TGACCTGCCC GACGACCGCG
TCCAGCGACG CGCCGTGCAG CGCGTTGTCC GTCGTGTACT CCCAGGACGG GACGTTCGAG
CGGTACCTGT TCTACCCGCG CAACCCGGAT CTGGTCCTGG TCGACACCAC CGCGGTCGCC
GCGGCGCCGG CCCGCCTGCT GGTCGCCGGG ATCGGCGACG CGCTCGCCAC CTGGTACGAG
GCCCGTACCG TCGGCGAGGC CCGGCGGGCC AACCAGCTCG ACGGCGCGCA GACGGCGACG
GCCGGCGCGC TGGCCGAGTT GTGCCGACGC ATCCTGTTCG ACGACGCGGC GGCGGCGATC
CGCGCGGTGC GCGCCGGCGC GGTGACACCG GCGCTGGAGC GGGTCGTCGA GGCGAACACG
CTGCTGTCGG GGCTGGGCTT CGAGTCGGGT GGGCTGGCCG TGGCGCACTC GGTGCACAAC
GGCCTGACCG TGGCCGCGGA GACCCACCGG TATCTGCACG GCGAGAAGGT CGCGTTCGGG
CTGATCGTCC AGCTCGTGGT CGAGGGACGG CCGGAGGAGG AGCTGGCCGA GGTGCTCGCG
TTCTGCGGCG GGGTGGGGCT GCCGCGCACA CTCGCCCAGG TGGGGCTGGC GGATCCGCCG
ATCGAGCTGC TGCGCGGCAT CGCCGTCCGG GCGCTCGCCG ACGGGGAGAC AGCCCACAAC
GAGCCCTTCG ACCTCGACCC GCCGATGATC GTCGACGCGA TCCTGGCAGC CGACGCCGCC
GGCCGGGCCA GCCGCTGA
 
Protein sequence
MLAVFGSPGR YVQGRDATAA LGPEMARLGL TGPAVIVTSG APLRLLEDTW RTSLDGAGIP 
YSVHLFGGEC SDQEIDRVVS AARDPEATVI VGAGGGKVLD TARAAAAALD LPVVTCPTTA
SSDAPCSALS VVYSQDGTFE RYLFYPRNPD LVLVDTTAVA AAPARLLVAG IGDALATWYE
ARTVGEARRA NQLDGAQTAT AGALAELCRR ILFDDAAAAI RAVRAGAVTP ALERVVEANT
LLSGLGFESG GLAVAHSVHN GLTVAAETHR YLHGEKVAFG LIVQLVVEGR PEEELAEVLA
FCGGVGLPRT LAQVGLADPP IELLRGIAVR ALADGETAHN EPFDLDPPMI VDAILAADAA
GRASR