| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5948 |
|---|
| Symbol | |
|---|
| ID | 5674269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7251771 |
|---|
| End bp | 7252763 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641244796 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001510198 |
|---|
| Protein GI | 158317690 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.119388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCAG CCGACGCGGT AGCCCCGGCC GGTGCGGCGG CTCCGGGGCA GGCGGGGGGA
CCCGGCCGGT CCGGGGAGGC CCGGCTGCGC GCCGAGAACC TCACGCTGGC CTATGAGCAG
CGCGTCGTCG CCACCGGTCT CGGGCTGCAG ATCCCGGACA ACTCCTTTAC CGTGATCGTC
GGGCCGAACG CCTGCGGCAA GTCGACGCTG CTGCGCGCGC TGGCCCGCAT GCTGCGCCCA
CGCACCGGCG CCGTGTACCT CGACGGGGCA CTGATCCGGT CACTGCCGTC CAAGGAGGTG
GCCCGCCGGC TCGGGCTGCT CCCGCAGACG TCGATCGCGC CGAGCGGCAT CTTCGTCTCC
GACCTGGTCG CGCGGGGGCG GTACCCACAC CAGCGGCTGC TTCGCCAGTG GTCCCGCGAC
GACGAGGCGG CGGTGCGCGA GGCACTGGCC GCAACCGGGA CCGACGACCT CGCCGACCGG
TACGTCGACG AGCTCTCCGG TGGGCAGCGC CAGCGGGTCT GGCTCGCGAT GGCGCTGGCC
CAGCAGACAC CGATCATGCT TCTGGACGAG CCAACGACGT TCCTCGACGT GGCCCACCAG
ATCGAGATCC TCGATCTCTG CGCCGACCTG CACGAGGATT CCGCCCGCAC GCTGGTGGCC
GTCCTGCACG ACCTCAACCA CGCCTGCCGG TACGCGACCC ACCTGGTGGC GATGAAGGGC
GGGCGGATCG TCGAGCAGGG AGTCCCGAAC GAGATCGTCA CCGCCGAGCT CGTCGAGGAG
GTCTTCGGGC TGCCGTGCAG CGTGGTTCCC GACCCCGAGA CCGGAACTCC GCTCGTCGTG
CCCGCCTCCC GCGCCCGGCG CCGGCAGCTC GCCGGGCGCG CGAACGAGCA CGACGGGACG
GCCGCCTATG CCGCTTCGGA GGCAGAGACG ACGGACGCGA CGAAGGCGAC CGAAGCCGCG
GATGCCGCGG CGATGACTGT CGGCGCCGGC TGA
|
|---|
| Protein sequence | MTPADAVAPA GAAAPGQAGG PGRSGEARLR AENLTLAYEQ RVVATGLGLQ IPDNSFTVIV
GPNACGKSTL LRALARMLRP RTGAVYLDGA LIRSLPSKEV ARRLGLLPQT SIAPSGIFVS
DLVARGRYPH QRLLRQWSRD DEAAVREALA ATGTDDLADR YVDELSGGQR QRVWLAMALA
QQTPIMLLDE PTTFLDVAHQ IEILDLCADL HEDSARTLVA VLHDLNHACR YATHLVAMKG
GRIVEQGVPN EIVTAELVEE VFGLPCSVVP DPETGTPLVV PASRARRRQL AGRANEHDGT
AAYAASEAET TDATKATEAA DAAAMTVGAG
|
|---|
| |