Gene Franean1_5937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5937 
Symbol 
ID5674258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7212373 
End bp7214226 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content75% 
IMG OID641244785 
Productserine/threonine protein kinase 
Protein accessionYP_001510187 
Protein GI158317679 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.346085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG GGGTTGCGTC CGGTCCAGTC AATTCGTCTG TCAGACTTGA CTCGATGGCC 
AGATCGGCGA GCGTGCCCCC CGACACCTCT CGGCACGGCA CACCCCGCTA TGTAGCGCAG
CGCTACCGCC TCGACACACC TATCGGGCGC GGTGGCGCCG GCGTTGTGTG GTGCGGCGAG
GACGAGCTGC TCCAGCGGCC AGTCGCAATT AAGGAAATCC TCGTGCCGAT GGCGGGCGCG
CAGGCGGAGC GGGATGCCAT CCGGGCCCGG GTGCTGCGCG AGGCGCGTGC GCTGGCCCGG
CTGCACAGCC CGGCCATCGT CTCGGTCTTC GACGTCGTCG AGGAGCACGA GCGGCACTGG
ATCATCATGG AGCTCGTCGA CGCGGACAGC CTCGGCGACA CCATCAAGAA CCATGGCCCG
CTGCCGTTCG ACCAGGTCGC CGCGATCGGG CTGGCGCTGG CCGACGCCCT CGCCGCCGCC
CACTCGGCCG GTGTGCTGCA CCGTGACGTG AAGCCGGGCA ACGTCCTGCT CGGCCGGGAC
AACCGGGTTC GCCTCACCGA CTTCGGCATC GCCGCGACCG AGGGCGACGT GACCCTGACC
GGGACGGGCG CGCTCGTCGG CTCCCCGGCC TACATCGCCC CGGAGCGGGT GCGTGGCTCC
TCGGGCACGC CCGCGAGCGA CCTGTGGGGG CTCGGCGCGA CGCTCTACTC GGCGGTCGAG
GGCTGCCCGC CCTTCGAGGG CCCGGAGACC TACGCGGTGC TGAGCGCCGT GGTGGAGGGC
CGGCGGCGGC CGTTCCGGCT CGCCGGGCCG CTGCGCGGGC TGCTCACCGA CCTGCTCGAC
CGTCCCGCCG AGCTGCGCCC GGACGTCGAC GAGATCCGCC GCCGGCTGAC GCCCATCGCG
CGCAACGCCA CCCCCGTCCC CGATGTCGTG ACGAATCCGC GCGGCCGCCA GTCCGAGCCC
GCCGCGGACG AGCCCTCGTC TGACGACGGC CTGGAGAACC TGGCCCCGCC GCCGCCTTCG
TCGGTGCCAC GGACCGACCG CCAGCCGGCG CCGAGCGGCG ACATCGGGGT GACCGACCGG
CTGATGCCGG GCCGGGAGAT GACGCCCCTG CCGCCGCGGG CGGACCTGTC GACTCCGGGC
GACGATCTGA CGGCCGTCGG GCACGCGCCG GTGACCGGGC CGGGCGTGGC GAGCACTGGC
CCGCACGACG ACATCACCCA GATCGGCGCG CTCGCCGCGG CCGTCGACAT GTTCGACCAG
GACGACGCCA ACATGGCCGC CGGCCTGCTC TCGCTGGACC GGGACGGCGA ACGCGCCGGT
CGCGGGGGCG GCGTCTCGCA CCGGGCACCG GCCGCGGGGC GCGGCGACCA CCGCGGCGAC
GCCCCCCGTG GATCGGCCCG CAAGGGTCGG CCGCCGACGA TCGCGATCGT CGCCGGCGCG
GCGGTGGCGG TGCTGGCGGG TCTCGCCGTC GCGCTCACCC TGCTGTTCAC CGGCAACGGG
GGCGGCTCCG ACGGCACCAG CGCGGAGGGC ACGTCTCCCT CGCCGTCGTT CGCCCCGCGG
ACACCGGACC CGCTGCCGAC CACCGACGTG GTCGTCACCG AGCCGGTTCA GACGCCGAAC
CGGCCGGCCT ACACGCCCCG GGCACGGCGG ACGACCACTC CGACGCCTCC GCCCCCGCCG
GCGGAGACCG ATCCGCCCGA GACGACTCCC ACGGCGGGGC CGACAACACC ACCGGTGACC
ACCGCGCCGG CGTCGTCGGC ACCTGCGACC ACACCGCCGA CGGAGGTCTC GCCGACCGGC
GCTGGGCCCA CGCCCACCCA GGTCGTCCCC ACGCCCCCCG GCGGCGGCGC CTGA
 
Protein sequence
MAGGVASGPV NSSVRLDSMA RSASVPPDTS RHGTPRYVAQ RYRLDTPIGR GGAGVVWCGE 
DELLQRPVAI KEILVPMAGA QAERDAIRAR VLREARALAR LHSPAIVSVF DVVEEHERHW
IIMELVDADS LGDTIKNHGP LPFDQVAAIG LALADALAAA HSAGVLHRDV KPGNVLLGRD
NRVRLTDFGI AATEGDVTLT GTGALVGSPA YIAPERVRGS SGTPASDLWG LGATLYSAVE
GCPPFEGPET YAVLSAVVEG RRRPFRLAGP LRGLLTDLLD RPAELRPDVD EIRRRLTPIA
RNATPVPDVV TNPRGRQSEP AADEPSSDDG LENLAPPPPS SVPRTDRQPA PSGDIGVTDR
LMPGREMTPL PPRADLSTPG DDLTAVGHAP VTGPGVASTG PHDDITQIGA LAAAVDMFDQ
DDANMAAGLL SLDRDGERAG RGGGVSHRAP AAGRGDHRGD APRGSARKGR PPTIAIVAGA
AVAVLAGLAV ALTLLFTGNG GGSDGTSAEG TSPSPSFAPR TPDPLPTTDV VVTEPVQTPN
RPAYTPRARR TTTPTPPPPP AETDPPETTP TAGPTTPPVT TAPASSAPAT TPPTEVSPTG
AGPTPTQVVP TPPGGGA