| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5934 |
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| Symbol | deoA |
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| ID | 5674255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7207246 |
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| End bp | 7208580 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244782 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001510184 |
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| Protein GI | 158317676 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0130951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG ATGCCCCCGG CAGCGATCAC GGCGGTCCTG CGGCGTCCCA CGACGTCGTC
GACCTCATCC GGGCCAAGCG CGACGGGGCG GCGCTGCCGG CGGACGCGGT CGCCTGGCTC
ATCGACGCCT ACACCCACGG CCGGGTCGCC GACGAGCAGA TGTCCGCCTA CCTGATGGCC
GTGGTCTGGC GCGGCATGGC CTCCGACGAA CTGGATCACT GGACGTCGGC GATGATCGCC
AGCGGCGAAC GGCTGGACCT GTCCGGCCTG ACCCGCCCGA CGGTCGACAA GCATTCCACC
GGCGGGGTCG GGGACAAGGT CTCGCTGGTC CTCGCCCCGC TGGTGGCCGC GTGCGGAGCG
GCCGTCCCGC AGCTGTCCGG ACGTGGGCTC GGGCACACCG GCGGGACGCT TGACAAAATG
GAGGCGATCC CCGGCTGGCG CGCCGATCTC GACCCGGGCA CCATGCGTGC CGTGCTGGCG
GACGTCGGCG CCGTCATCTG CGCCGCCGGC CCCGGCCTGG CTCCCGCGGA CCGCAGGCTG
TACGCCCTGC GCGACGTCAC CGGCACGGTC GAGTCCATCC CGCTGATCGC CTCCTCGATC
ATGAGCAAGA AGATCGCGGA GGGGACGTCC GCGCTGGTCC TGGACGTCAA GGTCGGCGCC
GGCGCCTTCA TGACCTCACT CGCCGACGCC CGCGAGCTCG CGCGGACGAT GGTCGGCCTG
GGCGCCCGCG CCGGGGTGCG CACCGAGGCC CTGCTCACCG CGATGGACAC CCCGCTGGGC
CGCACCGCGG GCAACGGCCC CGAGGTGACC GAGGCGGTCG AGACCCTGCG CGGGGCGGGC
CCGTCGGACC TCGTCGAGGT GACCGTCGCC CTCGCCCGCG TCATGCTGGA CATCGTCGGC
CTCAGCGGTG GTTCCGGTGC CGCGCCGGAT CCGGCGGAGG TCCTGGCCTC CGGGGCGGCA
TACGACGTGT GGCGCGCGAT GGTCGCCGCC CAGGGCGGCG ATCCGGACGC CCCGCTGCCG
ACCGCCGCGT TCACCCGCAC TGTCTCCGCT CCGGCGGACG GCTACCTGAG CCGCCTCGAC
GCCCGCGCCC TGGGCATCGC CGCCTGGCGC CTGGGCGCGG GGCGCGCGCG GAAGGAAGAT
CCCGTCTCGC CGGCAGCTGG ACTGCGTTGG CTGGCGGCGG TGGGGGAGCA GGTCCAGGCC
GGCGCCCCCC TGATCGAGCT CTACTCCGAC GACGAGGCGA CCTTCCCCCG CGCGCTCTCC
GCACTCGCGG ACGCCGTCTC GGTCACCGAC GAGCCGCCCC CTCCCACCCC CCTGATCCTC
GACCACATCC GCTGA
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| Protein sequence | MSADAPGSDH GGPAASHDVV DLIRAKRDGA ALPADAVAWL IDAYTHGRVA DEQMSAYLMA
VVWRGMASDE LDHWTSAMIA SGERLDLSGL TRPTVDKHST GGVGDKVSLV LAPLVAACGA
AVPQLSGRGL GHTGGTLDKM EAIPGWRADL DPGTMRAVLA DVGAVICAAG PGLAPADRRL
YALRDVTGTV ESIPLIASSI MSKKIAEGTS ALVLDVKVGA GAFMTSLADA RELARTMVGL
GARAGVRTEA LLTAMDTPLG RTAGNGPEVT EAVETLRGAG PSDLVEVTVA LARVMLDIVG
LSGGSGAAPD PAEVLASGAA YDVWRAMVAA QGGDPDAPLP TAAFTRTVSA PADGYLSRLD
ARALGIAAWR LGAGRARKED PVSPAAGLRW LAAVGEQVQA GAPLIELYSD DEATFPRALS
ALADAVSVTD EPPPPTPLIL DHIR
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