Gene Franean1_5883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5883 
Symbol 
ID5674206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7140197 
End bp7141141 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID641244733 
Productglycosyl transferase family protein 
Protein accessionYP_001510135 
Protein GI158317627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.692507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTCA GCGCCATCCA TCCAGCCGAA CAGCCGACCA AGACGGCTGT GGAGACACCG 
CCCTACGTGA CCGTGGTGCT CCCCTGTTAC AACGAGCAGG ATCACGTCGT CCTCGAGCTC
GAGCGCATCA CGGCGGCGAT GGACGTCAGC GGGTACAGCT ACGAGCTGTT GGTGATCGAC
GACAAGTCGA CCGACGGCAC GCTGGACGTC CTGCGCGACG TGGCGGCGAA CTTCCCCCAT
ATGCGGCTGA TGCCCTTCCG GCGCAACGGT GGCTCGGGCA CGGCGCGGCG CATCGGCACG
CAGGAGGCCC GCGGGAAGAT CGTCGTCTGG ACCGACGCGG ACATGACGTA CCCGAACGAG
CGCATTCCGG AGTTTGTTCG CTACCTGGAC GAAAACCCTG ACGTCGATCA GGTCGTCGGT
GCACGGACGA CCGAGGAGGG CACGCACAAG TGGGCCCGCG TGCCGGCCAA GTGGTTCATT
CGCATGGTCG CGCAGCGGCT GTCCGGGACG AAGATTCCCG ACCTGAACTC CGGCCTGCGC
GCGTTCCGCC GGGACGTGTC GCTTCCGTAC CTGCGCCTGC TCCCGCCGGG ATTCTCCTGC
GTCACCACCA TCACCATGGC GTTCCTGTCC AACCAGCACC CCGTGGACTA CCTGCCGATC
CACTACGCGA AGCGCTCGGG GACGTCCAAG TTCCACCCCT TCAAGGACGC CCGCCGATAC
ATCCTGCAGG TGCTGCGGAT GGTCATGTAC TTCGACCCGA TCAAGGTCCT GATGCCGGTC
GCCCTGTGGA TCATGGCGCT CGGTTTCGTG AAATTGATCG TCGACCTCGT CCGGTACGAC
CTGCGGGTGA CCACCTCCAC GCTGCTCGCG ATCCTCGTCG GGTTCCAGAT CGTGGTCCTC
GCGCTGATCG GTGACCTGGT GGCCCGGTCA CGCAGCGACA CCTGA
 
Protein sequence
MSVSAIHPAE QPTKTAVETP PYVTVVLPCY NEQDHVVLEL ERITAAMDVS GYSYELLVID 
DKSTDGTLDV LRDVAANFPH MRLMPFRRNG GSGTARRIGT QEARGKIVVW TDADMTYPNE
RIPEFVRYLD ENPDVDQVVG ARTTEEGTHK WARVPAKWFI RMVAQRLSGT KIPDLNSGLR
AFRRDVSLPY LRLLPPGFSC VTTITMAFLS NQHPVDYLPI HYAKRSGTSK FHPFKDARRY
ILQVLRMVMY FDPIKVLMPV ALWIMALGFV KLIVDLVRYD LRVTTSTLLA ILVGFQIVVL
ALIGDLVARS RSDT