Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5883 |
Symbol | |
ID | 5674206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7140197 |
End bp | 7141141 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641244733 |
Product | glycosyl transferase family protein |
Protein accession | YP_001510135 |
Protein GI | 158317627 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.692507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGTCA GCGCCATCCA TCCAGCCGAA CAGCCGACCA AGACGGCTGT GGAGACACCG CCCTACGTGA CCGTGGTGCT CCCCTGTTAC AACGAGCAGG ATCACGTCGT CCTCGAGCTC GAGCGCATCA CGGCGGCGAT GGACGTCAGC GGGTACAGCT ACGAGCTGTT GGTGATCGAC GACAAGTCGA CCGACGGCAC GCTGGACGTC CTGCGCGACG TGGCGGCGAA CTTCCCCCAT ATGCGGCTGA TGCCCTTCCG GCGCAACGGT GGCTCGGGCA CGGCGCGGCG CATCGGCACG CAGGAGGCCC GCGGGAAGAT CGTCGTCTGG ACCGACGCGG ACATGACGTA CCCGAACGAG CGCATTCCGG AGTTTGTTCG CTACCTGGAC GAAAACCCTG ACGTCGATCA GGTCGTCGGT GCACGGACGA CCGAGGAGGG CACGCACAAG TGGGCCCGCG TGCCGGCCAA GTGGTTCATT CGCATGGTCG CGCAGCGGCT GTCCGGGACG AAGATTCCCG ACCTGAACTC CGGCCTGCGC GCGTTCCGCC GGGACGTGTC GCTTCCGTAC CTGCGCCTGC TCCCGCCGGG ATTCTCCTGC GTCACCACCA TCACCATGGC GTTCCTGTCC AACCAGCACC CCGTGGACTA CCTGCCGATC CACTACGCGA AGCGCTCGGG GACGTCCAAG TTCCACCCCT TCAAGGACGC CCGCCGATAC ATCCTGCAGG TGCTGCGGAT GGTCATGTAC TTCGACCCGA TCAAGGTCCT GATGCCGGTC GCCCTGTGGA TCATGGCGCT CGGTTTCGTG AAATTGATCG TCGACCTCGT CCGGTACGAC CTGCGGGTGA CCACCTCCAC GCTGCTCGCG ATCCTCGTCG GGTTCCAGAT CGTGGTCCTC GCGCTGATCG GTGACCTGGT GGCCCGGTCA CGCAGCGACA CCTGA
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Protein sequence | MSVSAIHPAE QPTKTAVETP PYVTVVLPCY NEQDHVVLEL ERITAAMDVS GYSYELLVID DKSTDGTLDV LRDVAANFPH MRLMPFRRNG GSGTARRIGT QEARGKIVVW TDADMTYPNE RIPEFVRYLD ENPDVDQVVG ARTTEEGTHK WARVPAKWFI RMVAQRLSGT KIPDLNSGLR AFRRDVSLPY LRLLPPGFSC VTTITMAFLS NQHPVDYLPI HYAKRSGTSK FHPFKDARRY ILQVLRMVMY FDPIKVLMPV ALWIMALGFV KLIVDLVRYD LRVTTSTLLA ILVGFQIVVL ALIGDLVARS RSDT
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