Gene Franean1_5872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5872 
Symbol 
ID5674195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7126606 
End bp7127913 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content70% 
IMG OID641244722 
Productacyltransferase 3 
Protein accessionYP_001510124 
Protein GI158317616 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAAGC TGACCGAAGA TACTAGCGGC GCACCGGCGC CACCGGCGCG AACGGTTCGC 
CGAGCAACCA TCGGCGGCCA TAATCCGGCG CTCGACGGAC TGCGTGCCCT TGCCGTCCTG
ACGGTGTTCT TCCACCACAT GGACCTGGTG CCCGGCGGCT ACCTGGGTGT CGACCTCTTC
CTGGTGCTCA GCGGGTTTCT GATCACCGGC CTGCTGCTGG CCGAGCACGA CCGGGAGGGC
TGGATCTCGC TGCGCGCCTT CTGGGCCCGC CGGGGTTTCC GGCTCCTTCC CGCCTTCTAC
ATCTTTGTAG CAGCTGGCAT TCCACTCGTC CTTCTCGTCA AGGACACCGA CGACCAGTGG
CAGTTCCTAC GCAACGGTCT CGCCGCGGTC TTCTACGTCG CCAACATCCA GCGCACACTG
AATCCTCCGG ACAGCGGCGC ATGGTTCGGG CACGTGTGGA CACTCTCCCT CGAGGAGCAG
TTCTATCTGC TCTGGCCGAT CGCCCTGGTA CTGATCTGCC GCAGCGACCG CTGGCGGCGG
CGCCTGCCGG AGATCCTCAT CAGCGCCGTG ATCCTGGTGT TGATCTGGCG GGAGATCCTG
ATCGGCAGCG GCGTGTCGAA CTTCCGCATC TACTACGCGC CGGACACCCG CGTCGACTCG
CTGCTCGTCG GCTGCCTGCT CGCCACCTGG CGTCACGAGG CGCTGCGGTC GCGGGCAGGC
GACCGCTCCC TGGCCGGCGA CCTGTCCCGG GTGGCGGGCA GCCGCACCGC GCAGGTCCTG
GCCCGCGTCG CGTCGTTCGG CCCGCTCGGC CTGCTGGGCC TGGTGATCCT CTTCTTCACC
GGCCCCGAGC TGAAGGGCCC GCCGAACTGG ATGGCCCGCG GCGGCTACCT GCTCGTCGCC
GTCCTCGCCG CGGTCGCCGT CCTGGGCGCC GACCAGCACC GGCCCGGGTG GTACGACCGT
GTGCTCAGTG CCCGTCCGGC CGCCTGGGTG GGGCGGATCT CCTACAGCCT GTACCTGTGG
CACTTCCCCG TCACCGGGGT CGCCAACGAC TCGCTCGTCC CCCGTTTCGG CCGCGTCCCG
GCGGCCGGCG CCGCCCTCGT CGTCAGCCTC GGGCTCGCGT CGGCGTCCTA CTACTTCGTC
GAGCGGCCAG TGCAGCGCCG CCGGCCGGCG TGGGTGAACG CCCGCGGCAC CGCGCCGCGC
CGCGGCCGGA GGTCGATCGT GACGCCGTCC GCCGAGCCGC TGCTCGCCAC CACCCAGCCG
CTTCCGGTGA ACGGCGATTC CAAGCCGGTT CGGCGCATTC ACTCCTGA
 
Protein sequence
MEKLTEDTSG APAPPARTVR RATIGGHNPA LDGLRALAVL TVFFHHMDLV PGGYLGVDLF 
LVLSGFLITG LLLAEHDREG WISLRAFWAR RGFRLLPAFY IFVAAGIPLV LLVKDTDDQW
QFLRNGLAAV FYVANIQRTL NPPDSGAWFG HVWTLSLEEQ FYLLWPIALV LICRSDRWRR
RLPEILISAV ILVLIWREIL IGSGVSNFRI YYAPDTRVDS LLVGCLLATW RHEALRSRAG
DRSLAGDLSR VAGSRTAQVL ARVASFGPLG LLGLVILFFT GPELKGPPNW MARGGYLLVA
VLAAVAVLGA DQHRPGWYDR VLSARPAAWV GRISYSLYLW HFPVTGVAND SLVPRFGRVP
AAGAALVVSL GLASASYYFV ERPVQRRRPA WVNARGTAPR RGRRSIVTPS AEPLLATTQP
LPVNGDSKPV RRIHS