| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5830 |
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| Symbol | |
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| ID | 5674153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7072658 |
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| End bp | 7073893 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244680 |
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| Product | patatin |
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| Protein accession | YP_001510082 |
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| Protein GI | 158317574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGGA AGCGGGCTTC GCGCAGGGGG CTGGTGCTTG GCGCCGGCGG AGTGCTCGGC
TCAGCCTGGA TGATCGGCGC ACTGTGGGCC GTCGAGTCCG AACAGGCCAT CGACGTCCGG
GATCACGACC TGGTACTCGG GACATCCGCC GGATCGGTCA TCGCGGCGCT GCTCGGCCTG
GGGGTCGGCG CGGACGTGAT GGTCAATTCC GAGCGTGGGA TCTTCGAGCC GGGCTACCCC
GTGCTGGACT ACCGCGATCT CGGAGCGTCC CTGCCGCCCA GGCCGCGGAT GCGGATGGGC
TCGCCGCGGC TGCTGACCGC GACCGCTCTG CATCCCCGCC AAGCGACGCC GATGGTCGCG
CTGGCGGCGC TGCTCCCGCA GGGCCGTGGC CAGATCGCCG CGATCGGTGA TCTCGTGGCC
GAGGCGGCTG CCCGGATCGA GCATCCGCTG GACGCGCTGG CCGCCAAGCG CTCGGCCGCG
GTGCCCCTCG GCGCGCGCCG GGGACGTCAG CCCGCCTCGT TGGCGGCGAA CGGCTGGCCG
CGGTCCCCCC GGCTGCGTGT CGTCGCGATG GACTTCGACT CGGGCGGCAG GGTGCTCTTC
GGCTCCCCGG ACGCGCCGCG GGCGGCCCTG CCCGACTCGG TGATGGCCTC GTGCGCCATC
CCCGGCTGGT ACGCGCCGAT CAAGATCGCC GGCCGGCGCT TCGTGGACGG CGGCACCAGA
TCACCGGCGT CCCTGGACCT GCTGGTCGAG GAGGAACTGG ACGAGGTGCT CGTGCTCGCG
CCGGCCTGCT CCTTCGACAG TGACCGCCCG CGTGGCGCCA TCGCCCGGGT GGAGCGGCAG
ATGCGTCGGG CCGCGACGCG ACGGCTGGCC CGCGAGATCG AGCTGCTGGA GGCCGCCGGC
ACCCGGGTGA CAGCGCTGTG CCCGGGTCCG GAGGATCTAG AAGTGATCGG CGGGAACGTC
ATGGACCTGA CACGCCGCGC GGAGGTGTTC GAGACCTCGC TGCGAACCTC GGCCGCCGCC
CTGCGAACCG CGCTCGGCAC CGACACGCGC CCCACCCGTC CCATCCGCGC CACGCGGGCG
GCGGGAACAG CGACGGCGGG AACAACGGCT GGCCCGGGTG ACTCCGGTGC CACCGCGAGC
GGTCCGGGAC GTCGCGCCGG TGGCCGGGAG GCACTTGGCC GCGCGGCGGC GACCACCGCC
GCGGACCAGA AGGCGGACCT CGGTCTGGTC GGCTGA
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| Protein sequence | MPRKRASRRG LVLGAGGVLG SAWMIGALWA VESEQAIDVR DHDLVLGTSA GSVIAALLGL
GVGADVMVNS ERGIFEPGYP VLDYRDLGAS LPPRPRMRMG SPRLLTATAL HPRQATPMVA
LAALLPQGRG QIAAIGDLVA EAAARIEHPL DALAAKRSAA VPLGARRGRQ PASLAANGWP
RSPRLRVVAM DFDSGGRVLF GSPDAPRAAL PDSVMASCAI PGWYAPIKIA GRRFVDGGTR
SPASLDLLVE EELDEVLVLA PACSFDSDRP RGAIARVERQ MRRAATRRLA REIELLEAAG
TRVTALCPGP EDLEVIGGNV MDLTRRAEVF ETSLRTSAAA LRTALGTDTR PTRPIRATRA
AGTATAGTTA GPGDSGATAS GPGRRAGGRE ALGRAAATTA ADQKADLGLV G
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