Gene Franean1_5624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5624 
Symbol 
ID5673951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6839471 
End bp6839902 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content72% 
IMG OID641244477 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001509881 
Protein GI158317373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000415643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAAG CTCTGACCGC TGGCTTCGAC CTGCCCGCCG ATCCCCGGGC GGCCGGGCAA 
GCCCGTGGGC TGGTCGCCGA TCTGCTCGTG TCGTGGGGCT GTGGCAACGC CGCCGAAGTC
GCGAGACTGC TGGTCAGCGA GGTCGTCACG AACGCTGTTC GCTACGTGGG AGCCCGTGAG
GTGCTGCGCG TGTCGGTCGA GTGCCACGGC GAGCAGGTCC GGGTCGCCGT GAGCGATGGG
AGCCCGTTGC GCCCGGTGCT CAAGGCCGCC CAGGACGACG ACGAGTCCGG CCGCGGGATG
CAGCTCGTCG CCGCGCTCGC CAGCCGGTGG GGTGTCGTCG ACGATCCGCC CTCGACCGGC
CCGGGCAAGC AGGTCTGGTT CGAGCTGCCG GCCGTCCGGG AGGCGGCGAC GATCGGCTGC
GTCCTGAGAT GA
 
Protein sequence
MAEALTAGFD LPADPRAAGQ ARGLVADLLV SWGCGNAAEV ARLLVSEVVT NAVRYVGARE 
VLRVSVECHG EQVRVAVSDG SPLRPVLKAA QDDDESGRGM QLVAALASRW GVVDDPPSTG
PGKQVWFELP AVREAATIGC VLR