Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5606 |
Symbol | |
ID | 5673934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6801545 |
End bp | 6802567 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244460 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001509864 |
Protein GI | 158317356 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.410608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000556999 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCTCG GAATGATCGG ACTCGGCCGG ATGGGCGCGA ACCTCGTCCG CCGGCTGATG CGCGACGGGC ACGAATGTGT GGTCTACGAC GTGAACCCCG AGACGGTGAA GTCGCTGGCC GCCGAGGGCG CCGTCGGCGT CAACTCGCTG GCCGACTTCG CGGCCGCGCT GAGCACCCCG CGGGCGGCCT GGGTCATGGT GCCCGCGGGC CTGACCGGCC AGACCGTCTT CGAGCTCGCG GAGCACTTCG AGGCCGGCGA CATCATCATC GACGGCGGCA ACTCCTACTA CCGCGACGAC GTCGACCGGG CCGCGAAGCT CGCCGAGCGC GGCCTGCATT ACGTGGACGT CGGCACCTCC GGCGGCGTGT TCGGGCTGGA GCGCGGCTAC TGCCTGATGA TCGGCGGCGA GCCGGAGGTG GCCGCCCGCC TCGAGCCGCT GTTCGAGACG ATCGCGCCCG GCGTCGACAC CGCGCCGCGG ACCCCGGGCC GGACGGGCGA GATCGCCCAG GCCGAGAAGG GCTACCTGTA CTGCGGCCCG AACGGGGCAG GCCACTTCGT CAAGATGATC CACAACGGGA TCGAGTACGG CATGATGGCT GCCTTCGCCG AGGGCATGGG CATCCTGGAG AAGGCCGGCA TCGGGCGTTC CGAGGCCGCC CTGCACGACG CCGAGACGGC GCCGCTGGCC CATCCGGAGT ACTACCAGTA CGACTTCGAC ATCGCCTCCG TCGCCGAGGT GTGGCGGCGC GGCAGCGTGG TCAGCTCCTG GCTGCTGGAC CTGACCGCCA CCGCGCTCGC CGAGGACCCG CGGCTCTCCG AGTTCGGCGG GCGTGTCTCC GACTCCGGCG AGGGCCGGTG GACGGTGCTG GCCGCCGTCG AGGAGGGCGT CCCGGCCCAC GTGCTGACCG CGTCGCTCTA CGAGCGGTTC AGCTCCCGCG GCGAGTCGCT GTTCGCCGAC AAGCTGCTGT CGGCGATGCG CAAGCAGTTC GGCGGCCACG CCGAGAAGAA GGCGGAGGGC TAG
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Protein sequence | MQLGMIGLGR MGANLVRRLM RDGHECVVYD VNPETVKSLA AEGAVGVNSL ADFAAALSTP RAAWVMVPAG LTGQTVFELA EHFEAGDIII DGGNSYYRDD VDRAAKLAER GLHYVDVGTS GGVFGLERGY CLMIGGEPEV AARLEPLFET IAPGVDTAPR TPGRTGEIAQ AEKGYLYCGP NGAGHFVKMI HNGIEYGMMA AFAEGMGILE KAGIGRSEAA LHDAETAPLA HPEYYQYDFD IASVAEVWRR GSVVSSWLLD LTATALAEDP RLSEFGGRVS DSGEGRWTVL AAVEEGVPAH VLTASLYERF SSRGESLFAD KLLSAMRKQF GGHAEKKAEG
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