| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5570 |
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| Symbol | |
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| ID | 5673898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6750807 |
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| End bp | 6751490 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244424 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_001509828 |
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| Protein GI | 158317320 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACCG CGAATCATCC TGGGCCCCAG GACATGATTT CTCGTCCACG TGATTCACAC
AGGTCGGGCG GGGCGGCAGT AAAGGCGCCG GAGCTCGTCA TACTACTCAG CCCGTCCGGC
GACATCACAG GCACCACCCC GAAGGCTACC GTCCACGGAC CGCAAACTCC CCTGCACCTG
GCATTCTCCT CGTACGTCTT CGATGACATG GACCGGATCC TCGTCACGCG CCGCGCGTTG
GAGAAGCCGA CCTGGCCCGG CGTGCTGACC AACACCTGCT GCGGCCACCC GGCCCCCGGG
GAGGATTTCC GGGAAGCCAT CTCGAGGCGG CTCCAGGAGG AGCTGGGTCT GCAGGTCCAG
CGAATCGACC TGGCCCTGCC GGCGTTCCGC TACCGCTGCG TCATGGACGA CGGAATGGTG
GAGAACGAGA TCTGCCCGGT CTTTTTCACC CGGGCGTCGG GGCCGTTCCG AATCAATCCG
GACGAGGTGG CCGAGGCGTT CTGGCTCCCG TGGTCGAAGT TCGTCGACGA CGTGACGAGC
GGTGCCCTCG CGATCTCACC CTGGTGCCGG CTCCAGGTGG AGCAGCTGCG CAAGCTCGGG
CCGTCGCCCC GGCACTGGCC TTCGGCGCCG GATGACCAGC TCCCCCCGGC CGCCCGGCAG
AACCGCGCAG ACTACGCCGG CTGA
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| Protein sequence | MATANHPGPQ DMISRPRDSH RSGGAAVKAP ELVILLSPSG DITGTTPKAT VHGPQTPLHL
AFSSYVFDDM DRILVTRRAL EKPTWPGVLT NTCCGHPAPG EDFREAISRR LQEELGLQVQ
RIDLALPAFR YRCVMDDGMV ENEICPVFFT RASGPFRINP DEVAEAFWLP WSKFVDDVTS
GALAISPWCR LQVEQLRKLG PSPRHWPSAP DDQLPPAARQ NRADYAG
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