Gene Franean1_5549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5549 
Symbol 
ID5673879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6719907 
End bp6720560 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID641244405 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001509809 
Protein GI158317301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.693034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC CGCCCGCTTC CCTTAATCCG CGGGTTCGGG GTTCAAGTCG CGGCGCACCC 
GGTAGCTATC GGTCGCGCCG ACCATGCCGG TCGAGCTCGG CTGACAGCGG GACGACGGCC
TCGCGGAATA CGGTCTCGCC GGAAATGAGG TACGTTCCCG GCCCGGGAAC TGGCAGTCTC
GCGGTCATGG ATGTGCCGGC CGGATTCGAG ATCGACGACG ACCCCGAGCG GATCGACCGC
GACGCGGTGT GGGCCGCCCT GTCGACCGAG GTCTACTGGG ATCTGTGGCG CGAGCGCTCG
CACGTCGAGG CGCAGCTGGA CGGTGCCTGG CGGGTCGTCG GTGCTTACGA GGTGGCCACC
GGTCGGCAGG TCGGCTTCGC CAGGGCGATT TCCGACGGCG TCTCGTTCGC CTACCTCGCC
GACGTGGTGG TGACCGGTAG CGCCCGTGGC CACGGGCTAG GGAAGGCCCT GGTCACGGCC
ATGATCGAGG ATGGTCCCGG GGTCGAGTTC GAATGGCTGC TACACACCAA GGACGCCCAC
ACACTGTACG AGCGGTTCGG CTTCCGGATT CCCGAGCGCA CCGTCATGGA GCGGGGGAGC
CCCCGCGAGC CGGACTTCGA GGCGGCGCCG CCTCCCGATT CCGTGCGGCG ATAG
 
Protein sequence
MNKPPASLNP RVRGSSRGAP GSYRSRRPCR SSSADSGTTA SRNTVSPEMR YVPGPGTGSL 
AVMDVPAGFE IDDDPERIDR DAVWAALSTE VYWDLWRERS HVEAQLDGAW RVVGAYEVAT
GRQVGFARAI SDGVSFAYLA DVVVTGSARG HGLGKALVTA MIEDGPGVEF EWLLHTKDAH
TLYERFGFRI PERTVMERGS PREPDFEAAP PPDSVRR