| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5539 |
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| Symbol | |
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| ID | 5673869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6707141 |
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| End bp | 6708862 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244395 |
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| Product | replication initiator protein |
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| Protein accession | YP_001509799 |
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| Protein GI | 158317291 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.95807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCC CCTCCCTCAC CGGCCCTGAC CCGGCCGTCC CCCACGACCC CACCATCCGT
GACGATCGTG ACGATCGGCC CGGCTCGCGG ATGGCACGGA TGCGAATGCC GCTCGCCCGT
GCCGTCGTCG AAGCGGTCGC CGTGGAGAAC GGGGTGTGCG TTCGACCCAT GGCCATGCGC
CGCACGAACC TCGACACCGG CGAAACCGAG ATCATCCCCG TGCCCTGCGG CGCGACCCTC
GCCAGCAAGT GCCCGCCGTG CGCGGAGAAG GCCCGGCGGC TGCGGATGGC GCAGTGCAAA
GCGGGCTGGC ATCTCGATGA CGAACCCCTT CCCGACCCAG ACCCGCCGTC CGATGACGCC
AAGGTCCTCG CCGGGTTCCG CGCGGACCTG GAAGTCGCCC GGCGCGACGC GGAACGGGAC
AGTGACCCGG CCGGCGTCGC CGAGATCGAC ACGCTTATCG ACCAGGTGGA CGACGAACTC
AACGCCCTGG GCGTCCGCGG CAAAGCCGCT CCCGACAACC GGGACCGGCC ACGTCGTGCC
CGCTCGACCC GCCGGCGGCA GGACGCTGCC GATCTGCCGC GGCTGCCCGT GGAAAAGCGC
ACCGTCGGTC GGACGTACGA AGCGGCGGAC GGCACGACCT GGCGGCCGTC GATGTTCCTG
ACCCTCACCT GCGACACGTA CGGCCGGGTG ACCTCCGACG GCACTCCCGT CGATCCGGGC
TCGTACGACT ACCGGCGGGC GGCCCGCGAC GCGATCCACT TCCCGAAGCT GATCGACCGG
TTCTGGCAGA ACCTGCGTAG GGCCGTGGGC TGGGATGTGC AGTACTTCGC CGCGCTCGAA
CCCCAACGGC GGCTCGCCCC GCACCTGCAC GCGGCCGTCC GCGGAACCGT GCCGCGGGCC
CTGCTTCGGC AGGTGGCGGC AGCGACGTAT CACCAGGTGT GGTGGCCACC CTGCGACCAG
GCGGTCTACC CGGACACGGC CCTCCCGACC TGGGCGAACG ACACGAGTGG GTACGTCGAT
CCGGTTTCCG GCCGGTCGCT GCCGACCTGG GACGCGGCCC TTGACGCCGT CGGAGACGAG
GACGAACCGT CCCACGTGGT GCGCTTCGGC CCTCAACTGC AAGCGGACGG CTTCACCGCG
AACTCGGCGC ACACCGGCCG CATGATCGGC TACCTGTGCA AGTACCTGAC CAAGAGCCTC
GACGCCTGCC ACGCGGCCAC CACCGACCGG CAACGGCGGC ACGTCGACCG GCTCGCCGAA
GCCCTGCGCT ACGAACCTTG CGCCCCCACC TGCGCCAACT GGCTCCGCTA CGGGATCCAG
CCGAAGAACC CGAAACCGGG TCTCGTCCCG GGCCGCTGCC GCGGCAAGGC GCACCGGCGG
GAGACCCTCG GCTTCGGCGG ACGGCGGGTG CTGGTCAGTC GCAAGTGGTC CGGCAAGACA
CTGACCGACC ACAAGCATGA TCGCGTCGCG TTCATCCGGG CACAGCTCGA AGCCCTCGGC
CACACCGCCA CCGGCCCGGC CGCGGCGACC GACACCGACC CGGCGCGCAC CGTCTGGACG
CTGCTCCGGC CCGGCGACCC GGCCGCACCG CGGCGTGAAT ACCTGCTGTT GCAGGCGGTC
GCGCAACGCC ACGCCTGGCG CGCACAGCTC GACGCGGCCC GGCGCACCGC ACCCGACGAA
CTTCCGGCAA TCGGCCCACC GGGCAGGGCA CAAGCCGCCT GA
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| Protein sequence | MTLPSLTGPD PAVPHDPTIR DDRDDRPGSR MARMRMPLAR AVVEAVAVEN GVCVRPMAMR
RTNLDTGETE IIPVPCGATL ASKCPPCAEK ARRLRMAQCK AGWHLDDEPL PDPDPPSDDA
KVLAGFRADL EVARRDAERD SDPAGVAEID TLIDQVDDEL NALGVRGKAA PDNRDRPRRA
RSTRRRQDAA DLPRLPVEKR TVGRTYEAAD GTTWRPSMFL TLTCDTYGRV TSDGTPVDPG
SYDYRRAARD AIHFPKLIDR FWQNLRRAVG WDVQYFAALE PQRRLAPHLH AAVRGTVPRA
LLRQVAAATY HQVWWPPCDQ AVYPDTALPT WANDTSGYVD PVSGRSLPTW DAALDAVGDE
DEPSHVVRFG PQLQADGFTA NSAHTGRMIG YLCKYLTKSL DACHAATTDR QRRHVDRLAE
ALRYEPCAPT CANWLRYGIQ PKNPKPGLVP GRCRGKAHRR ETLGFGGRRV LVSRKWSGKT
LTDHKHDRVA FIRAQLEALG HTATGPAAAT DTDPARTVWT LLRPGDPAAP RREYLLLQAV
AQRHAWRAQL DAARRTAPDE LPAIGPPGRA QAA
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