Gene Franean1_5495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5495 
Symbol 
ID5673826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6650135 
End bp6651898 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content75% 
IMG OID641244350 
Productacyltransferase 3 
Protein accessionYP_001509756 
Protein GI158317248 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.126637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG GTTTCGACCG CGGGAGCGGT GGCCGGGCGC CGGGCCGGCC GGGTTCCGCG 
GCCACGGCGA GCACGGGGCC GGCCGCGCAG GCGGAGGCGG CCCGGTCCGC GCCGGTGGTG
TTCGCGGGCT TCGACGGGCT GCGCGCGATC GCGGCGCTGC TGGTCCTGGT CGTGCACGTG
TCGTTCAACA GCGGGCTGAC CACCGGCAAC TCCATCGGCG TCTACACCGC CCGCGGTGAG
ATCGGCGTCG CGGTCTTCTT CCTGATCTCG GGCTTCCTGC TCTACCGCCC GTTCGCCGTG
GCGCACCTGA GCGGCCGCGG CGCCCCGGAC GCCGCCGGCT TCTACATCCG CCGGCTGCTG
CGGATCATCC CGCTGTACTG GCTGGCGCTG GCGGTCGCGC TCAACGTCGT GCCCAACGAC
AAGATGGGCG TCCACGGCTT CGCCGGGCTG CTGCAGACGG CCTTCTTCAT GCAGGGCTAC
CGGCAGCACT GGGCGATCCA GGGCCTCACC CAGGCGTGGA CCCTCAACGT GGAGTTCGCC
TTCTACATCT CCGTCCCGTT CTATGCCTGG CTGCTCGTCC GCCGGCGCCG CCCGGCCCGC
TCCCAGCTCA GGGCCGAGCT TGTGGCCCTC GCCGTGATCT TCGTGATCAG CCGGGTCCTG
CACTACGCGC TGATCGGCTC GCACATCTGG TGGGCTGACG GCTGGACGGT CTGGCTGCCG
GTCTGGTGGG ACCTGTTCGC CATGGGGATG CTGCTCGCCG TCCTGTCGGC CTGGTACGTC
CAGAACGGGC GGACGCCGGC GTGGGCGCGG TGGCGGTGGT CCGGCGGGGC CTGCTGGCTC
ATCGCCGCGT TCTTCTACTG GGTGGCCAGC ACCCAGGTCG ACCTCCCGCT GCAGCCGCTG
TTCGTGCCGG ACCGCACCCA GGACATGGGC CGGCACCTGT TCTACGGCCT GTTCGGCTTC
TTCCTGATCC TGCCCGCGGT GTTCGGGCCG CCCGACCAGG GCCTGGTGCG GCGGTTGCTG
ACCTGCCGCC CGATGGCCTA CCTCGGCCTC ATCTCGTACG GGATCTACCT GTGGCACACG
GTCGTGATCG AGGTGGTCGC CGAGCACACC GGGACGGCCG CCGGCGAGCT GGCGTTCGCC
CCGTTCTTCC TGCTGGTGCT CGCGCTGACC TGTGCGGTCT CCACGATCAC CTACTTCCTG
GTGGAACGGC CCTGTATGAC GCTGGGTCGT GAGTGGGCCC GGCGGGTGCG CGCGCGGTCC
CGGCCGGTGC CGGCGGGGCC CGCCGAGCCG GTCCCGGCCG GCGCGGGGGC GCCGACCGGC
ACCGACGAGC GCTGGTCGGT GGAGTCCCAG GTGGACGAGA GGTGGCGCCA GGAACTGTCC
GGTAGCGGAC ACCACGGAGC CGACAGTGCC CCCGACGGCG AGTCGGCGCG GACGATGCCG
CTGCGGACCG GTTGGGCGCC CGGTGCCGGC TCCGGTGGCG GACCCGGCAC GCGCCCGGGT
GCCCCGGCGG CGGACCGGTC GCCCGGCCCG GCTCCCCGGC CGCGCGCGGA GCCGGGCCGC
GGGGCGCGGG AGCGTGGGGT ACCAGGTCCC GGCGGCTCCG CGCAGCCGCC GCCGGTCACC
CCCGCCCCCT GGCGCCCGGC CGGCGACCGC GCCCGGCGAC CCGGCCGGGA GCCGGCCGGC
GGGCCCGGCG GGCCCGGCCC GGACGGCGCC GCCGAGAGCC GACTGGGCCA CATTCGCGAC
GGCGGGCGGG ACGATGGCTG GTGA
 
Protein sequence
MTAGFDRGSG GRAPGRPGSA ATASTGPAAQ AEAARSAPVV FAGFDGLRAI AALLVLVVHV 
SFNSGLTTGN SIGVYTARGE IGVAVFFLIS GFLLYRPFAV AHLSGRGAPD AAGFYIRRLL
RIIPLYWLAL AVALNVVPND KMGVHGFAGL LQTAFFMQGY RQHWAIQGLT QAWTLNVEFA
FYISVPFYAW LLVRRRRPAR SQLRAELVAL AVIFVISRVL HYALIGSHIW WADGWTVWLP
VWWDLFAMGM LLAVLSAWYV QNGRTPAWAR WRWSGGACWL IAAFFYWVAS TQVDLPLQPL
FVPDRTQDMG RHLFYGLFGF FLILPAVFGP PDQGLVRRLL TCRPMAYLGL ISYGIYLWHT
VVIEVVAEHT GTAAGELAFA PFFLLVLALT CAVSTITYFL VERPCMTLGR EWARRVRARS
RPVPAGPAEP VPAGAGAPTG TDERWSVESQ VDERWRQELS GSGHHGADSA PDGESARTMP
LRTGWAPGAG SGGGPGTRPG APAADRSPGP APRPRAEPGR GARERGVPGP GGSAQPPPVT
PAPWRPAGDR ARRPGREPAG GPGGPGPDGA AESRLGHIRD GGRDDGW