Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5495 |
Symbol | |
ID | 5673826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6650135 |
End bp | 6651898 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244350 |
Product | acyltransferase 3 |
Protein accession | YP_001509756 |
Protein GI | 158317248 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.126637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.166118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCCG GTTTCGACCG CGGGAGCGGT GGCCGGGCGC CGGGCCGGCC GGGTTCCGCG GCCACGGCGA GCACGGGGCC GGCCGCGCAG GCGGAGGCGG CCCGGTCCGC GCCGGTGGTG TTCGCGGGCT TCGACGGGCT GCGCGCGATC GCGGCGCTGC TGGTCCTGGT CGTGCACGTG TCGTTCAACA GCGGGCTGAC CACCGGCAAC TCCATCGGCG TCTACACCGC CCGCGGTGAG ATCGGCGTCG CGGTCTTCTT CCTGATCTCG GGCTTCCTGC TCTACCGCCC GTTCGCCGTG GCGCACCTGA GCGGCCGCGG CGCCCCGGAC GCCGCCGGCT TCTACATCCG CCGGCTGCTG CGGATCATCC CGCTGTACTG GCTGGCGCTG GCGGTCGCGC TCAACGTCGT GCCCAACGAC AAGATGGGCG TCCACGGCTT CGCCGGGCTG CTGCAGACGG CCTTCTTCAT GCAGGGCTAC CGGCAGCACT GGGCGATCCA GGGCCTCACC CAGGCGTGGA CCCTCAACGT GGAGTTCGCC TTCTACATCT CCGTCCCGTT CTATGCCTGG CTGCTCGTCC GCCGGCGCCG CCCGGCCCGC TCCCAGCTCA GGGCCGAGCT TGTGGCCCTC GCCGTGATCT TCGTGATCAG CCGGGTCCTG CACTACGCGC TGATCGGCTC GCACATCTGG TGGGCTGACG GCTGGACGGT CTGGCTGCCG GTCTGGTGGG ACCTGTTCGC CATGGGGATG CTGCTCGCCG TCCTGTCGGC CTGGTACGTC CAGAACGGGC GGACGCCGGC GTGGGCGCGG TGGCGGTGGT CCGGCGGGGC CTGCTGGCTC ATCGCCGCGT TCTTCTACTG GGTGGCCAGC ACCCAGGTCG ACCTCCCGCT GCAGCCGCTG TTCGTGCCGG ACCGCACCCA GGACATGGGC CGGCACCTGT TCTACGGCCT GTTCGGCTTC TTCCTGATCC TGCCCGCGGT GTTCGGGCCG CCCGACCAGG GCCTGGTGCG GCGGTTGCTG ACCTGCCGCC CGATGGCCTA CCTCGGCCTC ATCTCGTACG GGATCTACCT GTGGCACACG GTCGTGATCG AGGTGGTCGC CGAGCACACC GGGACGGCCG CCGGCGAGCT GGCGTTCGCC CCGTTCTTCC TGCTGGTGCT CGCGCTGACC TGTGCGGTCT CCACGATCAC CTACTTCCTG GTGGAACGGC CCTGTATGAC GCTGGGTCGT GAGTGGGCCC GGCGGGTGCG CGCGCGGTCC CGGCCGGTGC CGGCGGGGCC CGCCGAGCCG GTCCCGGCCG GCGCGGGGGC GCCGACCGGC ACCGACGAGC GCTGGTCGGT GGAGTCCCAG GTGGACGAGA GGTGGCGCCA GGAACTGTCC GGTAGCGGAC ACCACGGAGC CGACAGTGCC CCCGACGGCG AGTCGGCGCG GACGATGCCG CTGCGGACCG GTTGGGCGCC CGGTGCCGGC TCCGGTGGCG GACCCGGCAC GCGCCCGGGT GCCCCGGCGG CGGACCGGTC GCCCGGCCCG GCTCCCCGGC CGCGCGCGGA GCCGGGCCGC GGGGCGCGGG AGCGTGGGGT ACCAGGTCCC GGCGGCTCCG CGCAGCCGCC GCCGGTCACC CCCGCCCCCT GGCGCCCGGC CGGCGACCGC GCCCGGCGAC CCGGCCGGGA GCCGGCCGGC GGGCCCGGCG GGCCCGGCCC GGACGGCGCC GCCGAGAGCC GACTGGGCCA CATTCGCGAC GGCGGGCGGG ACGATGGCTG GTGA
|
Protein sequence | MTAGFDRGSG GRAPGRPGSA ATASTGPAAQ AEAARSAPVV FAGFDGLRAI AALLVLVVHV SFNSGLTTGN SIGVYTARGE IGVAVFFLIS GFLLYRPFAV AHLSGRGAPD AAGFYIRRLL RIIPLYWLAL AVALNVVPND KMGVHGFAGL LQTAFFMQGY RQHWAIQGLT QAWTLNVEFA FYISVPFYAW LLVRRRRPAR SQLRAELVAL AVIFVISRVL HYALIGSHIW WADGWTVWLP VWWDLFAMGM LLAVLSAWYV QNGRTPAWAR WRWSGGACWL IAAFFYWVAS TQVDLPLQPL FVPDRTQDMG RHLFYGLFGF FLILPAVFGP PDQGLVRRLL TCRPMAYLGL ISYGIYLWHT VVIEVVAEHT GTAAGELAFA PFFLLVLALT CAVSTITYFL VERPCMTLGR EWARRVRARS RPVPAGPAEP VPAGAGAPTG TDERWSVESQ VDERWRQELS GSGHHGADSA PDGESARTMP LRTGWAPGAG SGGGPGTRPG APAADRSPGP APRPRAEPGR GARERGVPGP GGSAQPPPVT PAPWRPAGDR ARRPGREPAG GPGGPGPDGA AESRLGHIRD GGRDDGW
|
| |