Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5449 |
Symbol | |
ID | 5673780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6593028 |
End bp | 6593312 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641244304 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001509710 |
Protein GI | 158317202 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.265568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.248856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAGAA GTTGGAGATC ACCGCGCAGA TTCGGGACAC CACGTGGGTG TACCGCAGCA AGCGAGCGAG GAGCGACCGT GTCAGAAGGT ACTGTCAAGT GGTTCAACGC CGAGAAGGGC TTCGGCTTCA TCTCAGTGGA CGGCGGAGGG CCCGACGTCT TCGCCCACTT CTCGTCCATC GTGGGTGACG GCTACAAGTC GCTCGAAGAG GGGCAGCGCG TGTCCTTCGA CATCGAGCAG GGACAGAAGG GGCCGCAGGC CGCCAAGGTG CAGCCCCTCA GCTAG
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Protein sequence | MIRSWRSPRR FGTPRGCTAA SERGATVSEG TVKWFNAEKG FGFISVDGGG PDVFAHFSSI VGDGYKSLEE GQRVSFDIEQ GQKGPQAAKV QPLS
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