Gene Franean1_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5449 
Symbol 
ID5673780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6593028 
End bp6593312 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content63% 
IMG OID641244304 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001509710 
Protein GI158317202 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.265568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.248856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGAA GTTGGAGATC ACCGCGCAGA TTCGGGACAC CACGTGGGTG TACCGCAGCA 
AGCGAGCGAG GAGCGACCGT GTCAGAAGGT ACTGTCAAGT GGTTCAACGC CGAGAAGGGC
TTCGGCTTCA TCTCAGTGGA CGGCGGAGGG CCCGACGTCT TCGCCCACTT CTCGTCCATC
GTGGGTGACG GCTACAAGTC GCTCGAAGAG GGGCAGCGCG TGTCCTTCGA CATCGAGCAG
GGACAGAAGG GGCCGCAGGC CGCCAAGGTG CAGCCCCTCA GCTAG
 
Protein sequence
MIRSWRSPRR FGTPRGCTAA SERGATVSEG TVKWFNAEKG FGFISVDGGG PDVFAHFSSI 
VGDGYKSLEE GQRVSFDIEQ GQKGPQAAKV QPLS