| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5386 |
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| Symbol | |
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| ID | 5673718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6495142 |
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| End bp | 6495900 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244242 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509648 |
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| Protein GI | 158317140 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.690149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACTG GCGCCGGGTC GGGCGTCGGC CGCGCCTCGG CCCTGCGGTT CGCCAAAGAG
GGTGCGCTCG TCGTCTGCAC TGACATTCGG CTCCAGTGGG CGAAGGAGAC CGTGCGCCAG
ATCGAGGCTG CTGGCGGCGT CGCCATCCCG CAGGAATGCG ACGTGGCATC TGAACAGGAC
GTCGCCGCGA CGGTCGCCGC GGCCGTCGAG CGGTTCGGCC GGCTCGACAT CATGTTCAAC
AATGCCGGCA TTCCAGCGCC CCGCCGCGGC AAGACGATCG AGGACCACAC TATCGAGGAG
TTCGAGCGCA TCACGTCGGT CAACCTCCGT GGGGTGTTCC TCGGCTGCAA GTACGCGGTG
GCGCAGTTCA AGAAGCAAGG CGACGGCGGC GTCATTCTCA ACACCGGGTC GGTAGCCGGG
CTGGTCGGCC TGGGCGACAC GATATACGGA GCGACGAAGG GTGGCGTGCA CCAGCTGACC
CGCGGCGTCG CCATCGAATG CGCACCCTTC GGCATCCGAG TCAACGCGAT CTGCCCCTCC
GGCATGCCGT ACACCACCAA TTTCACGGCG GCAGGCGGAA CAGAGGTTCC GCCCGACGCC
CTCGAGCAGT ACGCCGAGCG GGTCGGGTCA ATCCATCCGC TGGGCAAGCC GATCAGGGCG
GAGGACTGCG CCGAGGCGGC GGTGTACCTG GTGTCGGACC GGGCGGCGAA TATCACAGGT
GTGTTGTTAC CGGTCGACGG AGGTTATGTA GCGAGATGA
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| Protein sequence | MITGAGSGVG RASALRFAKE GALVVCTDIR LQWAKETVRQ IEAAGGVAIP QECDVASEQD
VAATVAAAVE RFGRLDIMFN NAGIPAPRRG KTIEDHTIEE FERITSVNLR GVFLGCKYAV
AQFKKQGDGG VILNTGSVAG LVGLGDTIYG ATKGGVHQLT RGVAIECAPF GIRVNAICPS
GMPYTTNFTA AGGTEVPPDA LEQYAERVGS IHPLGKPIRA EDCAEAAVYL VSDRAANITG
VLLPVDGGYV AR
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