Gene Franean1_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5354 
Symbol 
ID5673688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6457711 
End bp6458301 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID641244212 
Producthypothetical protein 
Protein accessionYP_001509618 
Protein GI158317110 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.531773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCGCGATGGT CCTGTCCCTT GGAGTGACAA GCCTCGTCCT CGTGGCCTGC 
GGCAGCAACG GGGAGTCGGG CGCCGCCGCG GGCAGCGCGA CAACCGCGAC GACGTCGTCG
GCTCCGGCGC CATCGCCGAC CAGTACCCCC GCCAGCGGCG GCGGGACCAC CTCCGGACCG
GCCGCCACGC TGGACGTCAG CACCAGCCAG TTCGGCACGA TCCTGGTCGA CGGCGGTGGT
CGGACGCTCT ACCTGTTCGA AGCCGACCGG GGCTCCGCCT CCGTCTGCTC GCAAGACTGC
GCGACGGCAT GGCCGCCCTA CGTCGTGTCC CAGGTACCGG AAGCCGGTTC CGAGGTCACG
GCGAGCGAGA TCGGCACGAC CACCCGAGTG GACGGCACGC TTCAGGTGAC CTACCACGGC
CATCCGCTGT ACTACTTCGC CAAGGACACC ACGGCTGGGG CCGTCATGGG GCAGGGAATC
GACAAGTTCG GCGGCAAGTG GTTCGCCGTC GGACCTGACG GCAACCCGAT CGAAGGCGGC
TGGCCCACAC CGCCGGGCGA AAATTCCGAA TATTCCCGCG ACGCCGAGTA G
 
Protein sequence
MKKIAMVLSL GVTSLVLVAC GSNGESGAAA GSATTATTSS APAPSPTSTP ASGGGTTSGP 
AATLDVSTSQ FGTILVDGGG RTLYLFEADR GSASVCSQDC ATAWPPYVVS QVPEAGSEVT
ASEIGTTTRV DGTLQVTYHG HPLYYFAKDT TAGAVMGQGI DKFGGKWFAV GPDGNPIEGG
WPTPPGENSE YSRDAE