Gene Franean1_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5307 
Symbol 
ID5673641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6390413 
End bp6390814 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content72% 
IMG OID641244164 
Producthypothetical protein 
Protein accessionYP_001509571 
Protein GI158317063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.393038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.252141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGTGG CACCTGGTGA GGCATTCACC CACGAGCAGA CCGAGCGGAT CGAACGTGCT 
CGGCAGTCCG CGCAGACCCA GACCGGCATC CGCTTCGCTG TCCGCGTCGG TGCGCTGGAC
GGCGATCTGA AGCTCGCCGC CGAGCGGCTG CTGGGCGGCC TGGCCGATCC CCGCAACGAC
GAGGCGGTGC TCGTCGCCGT CTCCCCGGGG CAGCGGTTCG TCCGCGTTGT GACCACGCCG
GCCGCGAAGA AGCGCATCAA CGACTCGGCT GCCGGTCTGG CGGCCCTGGC CATGACATCC
AGCTTCGCTC TCGGTGACCT GGTGGGCGGT GTGATCACCG GGCTGCGTCA GCTCTCCGAC
GCCGCCGGCG CGCCTGCCGC GCCGAACGGG TCCCGCCGCT GA
 
Protein sequence
MPVAPGEAFT HEQTERIERA RQSAQTQTGI RFAVRVGALD GDLKLAAERL LGGLADPRND 
EAVLVAVSPG QRFVRVVTTP AAKKRINDSA AGLAALAMTS SFALGDLVGG VITGLRQLSD
AAGAPAAPNG SRR