Gene Franean1_5278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5278 
Symbol 
ID5673612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6351466 
End bp6351864 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID641244135 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001509542 
Protein GI158317034 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.299006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.352255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACGA CGATCTCGAC CACGCCGTTC GAGCTGCTCG TCGACCGCTC GGAGCACCAG 
CTGACGATCT TTCGCGACAA CACGGTGGTC GCGAAGCTGC CGGTCGGGAT CGGTACCGAG
GCGATCCCCA CCCCGACCGG CACGTTCTAC CTGACCGAGC TGTTGCGCCC GGGCGACCCG
AACGGCCCTT GGGGGCCGTT CGCCTTCGGC CTGTCCGGGT TCTCCGACGT GATCACCCAG
TTCAACGGCG CCGAGGGCAT CGTCGGCCTG CACGGCACCA ACCGCCCGGA CCTGGTCGGC
TCGGACGTGA GTATGGGATG CGTCCGGCTG CGCAACGCCG ACCTGCTCCG GTTGGTGGAC
GTCGTCCCGC TCGGCACCCC GATCACGATC GTCGGGTGA
 
Protein sequence
MDTTISTTPF ELLVDRSEHQ LTIFRDNTVV AKLPVGIGTE AIPTPTGTFY LTELLRPGDP 
NGPWGPFAFG LSGFSDVITQ FNGAEGIVGL HGTNRPDLVG SDVSMGCVRL RNADLLRLVD
VVPLGTPITI VG