Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5264 |
Symbol | |
ID | 5673598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6330287 |
End bp | 6332320 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244119 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001509528 |
Protein GI | 158317020 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.187686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAC AGTCGCTGTT TCCCCTCCTG GAGCCGCTGC TCCCACGGGT CCGGAAGCCC GTCCAGTACG TCGGCGGCGA GGGGAACGCG GTCGTCAAAC CCTGGGGCGA CGCCGCGGTC CACTGGTGTC TGATGTACCC CGACGCCTAC GAGGTCGGGC TGCCGAACCA GGGCGTCCAG ATCCTCTACG AGATCCTCAA CGAGCAGCCG GACGTCCTCG CGGAGCGCAC GTACTCGGTC TGGCCGGATC TCGAGGCCCT GATGCGCGAG CACCGAATAC CGCAGTTCAC GGTGGACGGC CATCGCCCGG TCGGGGATTT CGACCTCTTC GGGGTCAGCT TCTCCACCGA GCTCGGCTAC ACGAACCTGC TCTCGGCCCT GGATCTCGCC GGCATCCCGC TGCGCACCGC GGACCGTGCC GTCCCGGGCG ACGGCCTGAC CTGGCCGGTC GTCATCGCCG GCGGGCACGC GGCCTTCAAC CCCGAGCCGA TCGCGGACTT CGTCGACGCC GTCGTCCTCG GGGACGGCGA GCAGGCCGTC CTGCTGATCA CCGACATCAC CCGCGCCTGG AAGGCCGCCG GCGCGCCCGG TGGGCGCACG GAGCTGCTGC ACCGTCTCGC CCGCCGCAAG CTGGTCTACG TCCCGGAGTT CTACGACGTC AGCTACCGGC CGGACGGGCG GATCGCGGCG GTCACCCGCA ACCGGGACGA CGTCCCGGAG CGGCCCGCCA AGCACACCCT GACCGACCTC GACTCCTGGC CGTACCCGAA GACCCCGCTC GTACCGCTGG CCGAGACGGT GCACGAGCGG CTGAGCGTGG AGATCTTCCG CGGCTGCACC CGCGGCTGCC GGTTCTGCCA GGCCGGGATG ATCACCCGTC CGGTGCGGGA GCGCAGCATC ACCACCGTCG GCGAGATGGT CGACGCCGGG CTCGCGGCCT CGGGTTTCTC CGAGGTGGGC CTGCTGTCGC TGTCGAGCGC GGACCACAGC GAGATAGGCG AGATCGCCAA GGGTCTGGCC GACCGCTACG AGGGCACCAA CACGGCGCTG AGCCTGCCCT CCACCCGGGT GGACGCCTTC AACGTCACCC TCGCCAACGA GTTCTCCCGC AACGGCCGCC GCAGTGGGCT CACCTTCGCC CCCGAGGGCG GCTCGGAGCG GCTTCGCAGG GTCATCAACA AGACGGTCAG CGCGGAGGAC CTGGTCCGCA CGGTCAGCAC GGCCTACGCG AACGGCTGGC GGCAGGTGAA GCTCTACTTC ATGTGCGGCC TGCCCACCGA GACGGACCAG GACGTCCTGG AGATCGCCGA TCTCGCCCGC GAGGTCATCC GGGCGGGCCG GCGGGCCAGC GGTCACCGCG ACATCCGGTG CACCGTCTCG ATCGGCGGGT TCGTCCCCAA GTCGCACACG CCGTTCCAGT GGGCGGGGCA GGCATCCCAT GAGGTGACCG ACCAGCGCCT CAAGCTGCTG CGTGACACCG TGCGCGCCGA CCGTGAGGTC GGCCGGGCGG TCGGCTTCCG CTACCACGAC GGGCGTCCGG GCATCATCGA GGGGCTGCTC GCGCGCGGTG ACCGCCGGGT CGGCCGGGTG ATCGAGCGGG TCTGGCGCGA CGGTGGCCGC TTCGACGGCT GGAGCGAGCA CTTCTCGTTC GCCCGCTGGG AGGCCGCGTG CGAGGCGGAG CTCACCGGGC TCGGCGTCTC GCTGGACTGG TTCACGACCC GCGAGCGCGA CGAGCGCGAG ATCCTGCCGT GGGATCATCT CGATGCCGGC CTCGACCGTG ACTGGCTGTG GGCCGACTGG CAGGACGCCC TGCGCGCGAC CGAGCTGGAC GACTGCCGCT GGACCCCCTG CTACGACTGT GGGGTGTGCC CGACGATGGG GACCGAGAAC CAGATCGGCC CCACCGGGCG CACGCTGATC CCGGTGATCC CGGTGAGTCG TACCGATGCG TCGGCTGCAT CGGCTGAACC GGGCCCTGCC GGGTCGTCCC CTGTTCCGTC CGACCTGGCG CGGGTCAGTG CCTCGTCGAC CTGA
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Protein sequence | MSGQSLFPLL EPLLPRVRKP VQYVGGEGNA VVKPWGDAAV HWCLMYPDAY EVGLPNQGVQ ILYEILNEQP DVLAERTYSV WPDLEALMRE HRIPQFTVDG HRPVGDFDLF GVSFSTELGY TNLLSALDLA GIPLRTADRA VPGDGLTWPV VIAGGHAAFN PEPIADFVDA VVLGDGEQAV LLITDITRAW KAAGAPGGRT ELLHRLARRK LVYVPEFYDV SYRPDGRIAA VTRNRDDVPE RPAKHTLTDL DSWPYPKTPL VPLAETVHER LSVEIFRGCT RGCRFCQAGM ITRPVRERSI TTVGEMVDAG LAASGFSEVG LLSLSSADHS EIGEIAKGLA DRYEGTNTAL SLPSTRVDAF NVTLANEFSR NGRRSGLTFA PEGGSERLRR VINKTVSAED LVRTVSTAYA NGWRQVKLYF MCGLPTETDQ DVLEIADLAR EVIRAGRRAS GHRDIRCTVS IGGFVPKSHT PFQWAGQASH EVTDQRLKLL RDTVRADREV GRAVGFRYHD GRPGIIEGLL ARGDRRVGRV IERVWRDGGR FDGWSEHFSF ARWEAACEAE LTGLGVSLDW FTTRERDERE ILPWDHLDAG LDRDWLWADW QDALRATELD DCRWTPCYDC GVCPTMGTEN QIGPTGRTLI PVIPVSRTDA SAASAEPGPA GSSPVPSDLA RVSASST
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