| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5258 |
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| Symbol | obgE |
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| ID | 5673592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6321096 |
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| End bp | 6322721 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244113 |
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| Product | GTPase ObgE |
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| Protein accession | YP_001509522 |
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| Protein GI | 158317014 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.337859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGT TCGTCGACCG GGTGGTTCTG CACGCCGCCG CCGGCGACGG CGGGCACGGC
TGCTGCTCGA TCCACCGTGA GAAGTTCAAA CCGCTGGGCG GGCCGGACGG CGGTAACGGC
GGCCGCGGCG GCAACGTGCT GCTGCGCGTC GACAGCGGCG TGACGACCCT GCTCGACTTC
CACTTCCACC CGCATCAGCG GGCCGGCGGC GGCCGTCCGG GCCAGGGCTC CAACCGCCAC
GGCGCGGACG GCGACGACCT GGTTCTGTCG GTGCCGGACG GTACCGTCGT GCTCTCGCCC
GACGGCGAGC AGATCGTCGA CCTGGTCGGG GCGGGGAGCA CCTACGTCCT GGCGCACGGC
GGCCGCGGGG GGCGGGGTAA CGCCTCGCTG GCCTCGGCCC GCCGCAAGGC GCCCGGCTTC
GCCGAGCTTG GGGAGCCGGG TGAGCAGCTC GACGCCGTCC TCGAGCTCAA GAGCGTGGCC
GACGTCGCGC TCGTCGGTTT CCCGAGTGCC GGGAAGTCCT CGCTGGTCTC GGTGCTCAGC
GCCGCGCGTC CCAAGATCGC CGACTACCCG TTCACCACCC TGGTCCCGAA CCTGGGCGTC
GTCCAGGCCG GTGACCATCG CCCGTTCACG GTCGCGGACG TCCCCGGGCT GATTCCGGGT
GCCAGCCAGG GCCGGGGGCT GGGCCTGGAG TTCCTGCGGC ACATCGAGCG GTGCTCGCTG
ATCGTCCACG TTCTCGACTG CGCCACGCTC GAGCCCGGCC GTGATCCGCT CACCGACCTC
GACGTGATCG AGGCGGAGCT CGCCGCGTAC ACGACCGACC TGTCGGACCG CCCGCGTCTC
GTGGTGCTGA ACAAGGTCGA CGTCCCGGAC GCGGCCGAGC TCGCCGAGCT GGTCACCCCT
GACCTGCAAG CCCGCGGTCT GGCCGTGCAC CAGATCAGCA CGGCGAGCCG GCACGGGGTC
CGCGGGCTCG CGCTCGCGCT CGCCGAGCTC GTCGCCAGCC TGCGCGCCGC GGTGCCCAGC
CCGGCCGCGA CCCGGATCGT GCTGCGCCCG CGCGCGGTGG ACGAGCCGGA CTTCACGGTG
CGGGCCGAGG GCGACGGCTT CGTCGTCGGC GGGACCAAAC CGCTGCGCTG GGTGCGCCAG
ACCGACTTCA GCAACGAGGA GGCGATCGGC TACCTGGCCG ACCGCCTGGC CCGGCTGGGC
GTCGAGAAGG AGCTCGCCAA ACGGGGTGCC TTCCCCGGGG TCGCGGTCAC GATCGGTGCC
GTCACCTTCG ACTGGGAGCC GACGCTGTCC GGCCGGGAGG CGCTGCTCGC CGCCGGCGGC
GGGGATGGCG ACGGCTACGG CGAGGCGGGC TACGGCGCCG TCGACACCGC CGTCACGATC
GCGACCGTGG GCGGGTCCGG GGGCACGAGA GCCGGCGCGC GCGGCGGAGC AGTGGTCTCC
GACCTCCCGC TCGGCCCGCG GGGCACCGAC CTGCGGCTGC GGACGTCCAA GCGGCTCACC
AGGGCACAGC GGACGGCCCT GAGTGACTCC GCTGACGACT TCGACGACGG TGCCGGCTTC
AGCGACAGTG CGGCCTTCGG CGACAGCGGT GGCTCCGGCG GTGACGCCGA CGGCGGGCGT
GGCTAG
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| Protein sequence | MPTFVDRVVL HAAAGDGGHG CCSIHREKFK PLGGPDGGNG GRGGNVLLRV DSGVTTLLDF
HFHPHQRAGG GRPGQGSNRH GADGDDLVLS VPDGTVVLSP DGEQIVDLVG AGSTYVLAHG
GRGGRGNASL ASARRKAPGF AELGEPGEQL DAVLELKSVA DVALVGFPSA GKSSLVSVLS
AARPKIADYP FTTLVPNLGV VQAGDHRPFT VADVPGLIPG ASQGRGLGLE FLRHIERCSL
IVHVLDCATL EPGRDPLTDL DVIEAELAAY TTDLSDRPRL VVLNKVDVPD AAELAELVTP
DLQARGLAVH QISTASRHGV RGLALALAEL VASLRAAVPS PAATRIVLRP RAVDEPDFTV
RAEGDGFVVG GTKPLRWVRQ TDFSNEEAIG YLADRLARLG VEKELAKRGA FPGVAVTIGA
VTFDWEPTLS GREALLAAGG GDGDGYGEAG YGAVDTAVTI ATVGGSGGTR AGARGGAVVS
DLPLGPRGTD LRLRTSKRLT RAQRTALSDS ADDFDDGAGF SDSAAFGDSG GSGGDADGGR
G
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