| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5247 |
|---|
| Symbol | nadD |
|---|
| ID | 5673581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6308792 |
|---|
| End bp | 6309409 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641244102 |
|---|
| Product | nicotinic acid mononucleotide adenylyltransferase |
|---|
| Protein accession | YP_001509511 |
|---|
| Protein GI | 158317003 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.538972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.371398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGACTGG GCGTGATGGG CGGGACGTTC GATCCCGTCC ACAACGGGCA CCTGGTCGCG
GCCAGCGAGG TCGCGGCGCT CTTCGACCTG GACGAGGTCG TCTTCGTGCC GAGCGGGCGG
CCGTGGCAGA AGGTCGACCG CGAGGTCTCC GCCGCCGAGG ACCGCTACCT GATGACCTTC
CTGGCAACGG CCGAGAACCC GCGGTTCACC GTCAGCCGCA TCGACATCGA GCGCAGCGGC
CCGACGTACA CCATCGACAC GCTGCGGCAC CTGCGCGGGC AGCGGCCGGG TGACGAGCTG
TTCTTCATCA CCGGCGCCGA CGCCCTCGCC CAGATCTTCA CCTGGCGGGA CCACACCGAG
CTCTTCGGGC TGGCGCACTT CATCGGAGTG ACCCGGCCGG GCTACCACCT ACGTCGCCAC
GCCAGCCTGC CCGACGAGTC GGTCAGCCTC CTCGAGGTAC CGGCGCTCGC GATCTCCTCC
TCGGACATCC GCCAGCGGGT CGCCCGGGCC GCTCCCATCT GGTACCTGAC CCCGGACGGC
GTCGTCCGCT ACATCGCCAA ACGCGGGCTG TACGACCCGC GGTCGGCCGT CGGCCCGCCC
CCCGTCGACC CCGGGTGA
|
|---|
| Protein sequence | MRLGVMGGTF DPVHNGHLVA ASEVAALFDL DEVVFVPSGR PWQKVDREVS AAEDRYLMTF
LATAENPRFT VSRIDIERSG PTYTIDTLRH LRGQRPGDEL FFITGADALA QIFTWRDHTE
LFGLAHFIGV TRPGYHLRRH ASLPDESVSL LEVPALAISS SDIRQRVARA APIWYLTPDG
VVRYIAKRGL YDPRSAVGPP PVDPG
|
|---|
| |