| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5223 |
|---|
| Symbol | |
|---|
| ID | 5673557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6271683 |
|---|
| End bp | 6272939 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641244077 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001509487 |
|---|
| Protein GI | 158316979 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0184372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCT ACCTCGTCTA CTGCACGACC GCTCCCGGTC ACCTGTTTCC GCTGGTCCCA
GGCCTGCGCG CCCTGCGCGA CCGGGGGCAC GAGATCCACC TGCGCATCGG CGCGCGGCTG
GTGGACGGCC CGTGGGCCGA CGGCCTGAAC GTCGCGCCGA CCGACCCGCG CATCGACGAG
ATCGAGGTGA AGGCGGACGC GAGCGGCACC GGCCCGGCCC AGCTCCGACG GGCGCTGGCC
GGGCTGATGT CGCGCGGCCC CCTGGAGCGG GCCGACCTCG AACGGGCCGT CGCCCAGGTG
GACCCGGACG TGATCCTCGT CGACACCAAC GCCTACGGCG CCGCGATCGC CGCGCGGGCG
TCCGGGCGGC CGTGGGGGAT CGTGCTGCCG TCCCTTGTCG CCCTGCCGGG CAAGGGAATC
CCCCCGTACG GCCTGGGCCT CGCGCCGGGA CGGGGGCCGC TCGGCCGGCT GCGCGACCGG
GTGGTGTGGC CGCTGGTCAT CCGCCAGTTC GGCGCGGCGA TGCTGCCCCC GCTCAACGCC
ATGCGGGCGG ACGCCGCCCT CCCGCCGCTG ACCAGCCCGA TCGACTACTT CCTGGAGGCC
GACCGGCTTC TGGTGCTGAC CGGCGACCCG CTGGAGTACC CGCGCTCGGA CGCGCCGGAG
CATGTCCGCT TCGTCGGCGC CCAGATCTAC GACCCGCCCG GCGAGGCACC GGCCTGGCTC
GCCGAGGACG GCGACCCCTG GGTGCTCGTC ACCACCTCGA CCGACTACCA GGGCGACGAA
CGCCTCGCCG TGGCCGCCGT CGAGGCCCTG CGTGACGAGC CGGTCCGCGT GGTGATCACC
CTGGCGGACG CCTACGGGCA CGTCGAGCTG CCGGCCGCGG CGAACGTCCG GGTCGAGCGG
TTCGTGCCGC ACGGCCCGGT GCTCGAGCGC GCCGCCGCCG TCATCTGCCA CAGCGGGATG
GGCATCGTGC ACAAGGCCAT CGCCGCCGGT GTGCCCGTCG TCGCCGTGCC GTTCGGGCGG
GATCAGCCCG AGGTCGCGCG CCGGGTCGTG GAGGCCGGCG CAGGCGTCAT GCTGCCGGCC
AGGCGGCTGA CCGCGGAGCG GCTGCGGGAC GCGCTGCGCA CCGCGATGAG CAGGCGCGCC
GGGGCGCTGA ACGCCGCACG CCGGATCAGG GCGAGCGGCG GCGGCGAGAG CTTCGCCACC
GAGGCAGAGG GCCTCGCGGC CGCGCCGCGG CCCGCCGCCG CACGGCCCGC CGCCTGA
|
|---|
| Protein sequence | MARYLVYCTT APGHLFPLVP GLRALRDRGH EIHLRIGARL VDGPWADGLN VAPTDPRIDE
IEVKADASGT GPAQLRRALA GLMSRGPLER ADLERAVAQV DPDVILVDTN AYGAAIAARA
SGRPWGIVLP SLVALPGKGI PPYGLGLAPG RGPLGRLRDR VVWPLVIRQF GAAMLPPLNA
MRADAALPPL TSPIDYFLEA DRLLVLTGDP LEYPRSDAPE HVRFVGAQIY DPPGEAPAWL
AEDGDPWVLV TTSTDYQGDE RLAVAAVEAL RDEPVRVVIT LADAYGHVEL PAAANVRVER
FVPHGPVLER AAAVICHSGM GIVHKAIAAG VPVVAVPFGR DQPEVARRVV EAGAGVMLPA
RRLTAERLRD ALRTAMSRRA GALNAARRIR ASGGGESFAT EAEGLAAAPR PAAARPAA
|
|---|
| |