Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5174 |
Symbol | |
ID | 5673508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6208899 |
End bp | 6210311 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641244028 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_001509438 |
Protein GI | 158316930 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00221395 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTTG TGATCATTGG AGCGGGTATC GCAGGGCTGT CCGCCGCGAG CGCGCTGACG GGCAGGGCCG AGGTCACCGT GGTCGAGGCC GGTGACCGCA TCGGCGGCAA GCTGCGCACC ACCCCGATCG AGGGGCTGGC GGTGGAGGAG GGCGCGGAGG CCTTCCTCGT CCGCGTGCCG GAGGCGCTCC GGCTGGCCCG GCACGTCGGG CTCGGGCACG ACATCGTGCA TCCGACGACG ACCAAGGCCT CGCTGTGGGT GGGCGGGCGG CGCCGTCCCA TCCCGCCCAA CACGATGCTG GGGGTCCCGA CCGACGTGCT CGGCCTGGTG CGCTCCCGGG TGCTCTCGCC CTTCGGGCTG CTGCGCGCCG CGGCCGACCT GGTGCTCCCG CGCACGACCC TGCCGACGGA CCCGACGGTC GGCGGGTACG TCGGCGCCCG CGTCGGGCGG GAGATCGTGG ACCGGCTGGT GGACCCGCTG CTCGGCGGCG TCTACGCCGG GCGGGCCGAC GCGCTCTCGC TGCAGGCGAC CGTCCCCCAG CTCACCCCGA TCGCGACCGA GGACCGCTCG CTGCTGCTCG GCGCGCACCG CGTCCGGGCC CGGACCGGAC CGGCCCCGGC GCAGACGCCC GTGTTCGCCT CGCTGCGCGG CGGCCTGGGC TCGTTCGCGG AGAAGGTGGC CAGCACCAGC GGTGCCACGG TGCGGACCGG GCTGATGGCC CGGGAGCTGC GCCGGGTCGA GGGCGGCTGG CAGGTGCGCT GCGACCCGGT GGGCGGCGGT GAGGTGCCCC CGCCCCTGGT CGCCGACGCG GTGATCCTCG CGGTTCCCGC CGGCGCCGCG CGTGATCTCC TCTCCCCGAT CGCCCCGCAC GCGGCCGCGC CCCTCGCGGG GGTGCCATAC GCGTCGGTGG GCCTGGTCAC ACTGCTCTAC CGGGGAGCTG TGCCGCCGCC CGGCAGCGGC CTGCTCGTCC CCGCGCGGGC CGGCCTGTCG ATCAAGGCGG TGACCTACCT GTCGGTGAAA TGGCCGCACA TCGCCCGCGG TGGCGACCTG ACGGTCGTGC GGGCCAGCGT GGGCCGTGCC GGCGCCGACG ACGACCTGCG GCGCGGCGAT GTCGAGCTCG CCGGCGTCGC CGCCGCCGAG GTCGCCCAGG TCACCGGGAT CAGCGCCCGT CCGATCGCCA ACCGGGTCAG CCGCTGGGGC GGGGCGCTCC CGCAGTACCT GCCGGGGCAC CTAGGTCGGA TCGCGGCCGT CCGGCGCGCG CTGCCGGCGG GCATCGCGCT CGCCGGCGCC GGCTACGACG GTGTGGGCAT CCCGGCGTGC ATCCGTTCCG GCGAGGCGGC CGCGGCGTCG GTGGTGGGCC AGCTGCGGCC GGACGGGACG CAGGCGGCGG AGTCCGAGCC GGCGGGGGCC TGA
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Protein sequence | MRVVIIGAGI AGLSAASALT GRAEVTVVEA GDRIGGKLRT TPIEGLAVEE GAEAFLVRVP EALRLARHVG LGHDIVHPTT TKASLWVGGR RRPIPPNTML GVPTDVLGLV RSRVLSPFGL LRAAADLVLP RTTLPTDPTV GGYVGARVGR EIVDRLVDPL LGGVYAGRAD ALSLQATVPQ LTPIATEDRS LLLGAHRVRA RTGPAPAQTP VFASLRGGLG SFAEKVASTS GATVRTGLMA RELRRVEGGW QVRCDPVGGG EVPPPLVADA VILAVPAGAA RDLLSPIAPH AAAPLAGVPY ASVGLVTLLY RGAVPPPGSG LLVPARAGLS IKAVTYLSVK WPHIARGGDL TVVRASVGRA GADDDLRRGD VELAGVAAAE VAQVTGISAR PIANRVSRWG GALPQYLPGH LGRIAAVRRA LPAGIALAGA GYDGVGIPAC IRSGEAAAAS VVGQLRPDGT QAAESEPAGA
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