| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5108 |
|---|
| Symbol | |
|---|
| ID | 5673443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6116567 |
|---|
| End bp | 6117595 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641243959 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001509373 |
|---|
| Protein GI | 158316865 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.34364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.11344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACGG AGCCGGGAGT ACTGCGCTGG CGCGACCCGG CGGGCGAGAT CGATCATCTG
TCCGAGGTCG CCGACCGGAT CGGTCGCTCG GTGGAGACCG TCATCGACGG CAAGTCGGAT
GTGGTCCGCA CGGCTCTGGT GGTCCTGTTC GCCGAGGGGC ACCTCCTCAT CGAGGACGTG
CCGGGCGTCG GCAAGACCAT GCTCGCCAAG GCCCTCGCCC GCTCGATCGA CGCGCGGGTG
CGGCGGATCC AGTTCACTCC GGACCTGCTC CCCAGCGACG TGACCGGCGT CAGCGTCTAC
AACCAGGGCA CCCGCGACTT CGAGTTCCGG CCGGGCCCGG TGTTCGCGAA CATCGTGGTC
GGCGACGAGA TCAACCGGGC CGAGCCCAAG GCCCAGTCGG CCCTCCTGGA ATGTATGGAG
GAGCAGCAGG TGACCGTGGA CGGTGTCACC TACCGCCTCG AGGCCCCGTT CATGGTCGTC
GCCACCCAGA ACCCGATCGA GATGGACGGC ACCCGGGCGC TCCCCGAGGC CCAGCGCGAC
CGCTTCACCG CCCGGGTCTC GATGGGCTAC CCCTCGCCCG GCGCCGAGCT GGCGATGCTC
GACAACCACG GCCAGAGCGA CCCGCTGACC AACGTCGTCC CGGTCACCAC CGCGGCCGAG
GTCGCCAAGC TGGCGAACGC GGTGCGCTCG GTACACGTCT CCGGCGAGGT CCGCCAGTAC
ATCGTCGACC TGGTCGGGGC CACCCGGCGG CACCCGGAGA TCACGCTGGG CGCGTCTCCG
CGGGCCACGC TGCACCTGAT CCGTACGGCC CGGGCGCACG CCGCGGTCAG CCGGCGCGGC
TATGTGCTCC CGGACGACGT CCAGGCGGTC GCCGGCCCGG TGCTGGCGCA CCGCCTGCTG
TTGCATCCGG AGATCATGCT GTCGGGTGAG CCGACGAACG ACATCGCGGC CCGGATCGTG
ACCGACCTGA TCGCCCGGAT CCCGATCGCC CGGCAGGACC CGGCACGTCC CTCGCGACGT
GGCCGTTAG
|
|---|
| Protein sequence | MVTEPGVLRW RDPAGEIDHL SEVADRIGRS VETVIDGKSD VVRTALVVLF AEGHLLIEDV
PGVGKTMLAK ALARSIDARV RRIQFTPDLL PSDVTGVSVY NQGTRDFEFR PGPVFANIVV
GDEINRAEPK AQSALLECME EQQVTVDGVT YRLEAPFMVV ATQNPIEMDG TRALPEAQRD
RFTARVSMGY PSPGAELAML DNHGQSDPLT NVVPVTTAAE VAKLANAVRS VHVSGEVRQY
IVDLVGATRR HPEITLGASP RATLHLIRTA RAHAAVSRRG YVLPDDVQAV AGPVLAHRLL
LHPEIMLSGE PTNDIAARIV TDLIARIPIA RQDPARPSRR GR
|
|---|
| |