| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5094 |
|---|
| Symbol | |
|---|
| ID | 5673429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6096016 |
|---|
| End bp | 6097644 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243945 |
|---|
| Product | cell division protein FtsZ |
|---|
| Protein accession | YP_001509359 |
|---|
| Protein GI | 158316851 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0206] Cell division GTPase |
|---|
| TIGRFAM ID | [TIGR00065] cell division protein FtsZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0550491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00981313 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCC CCCAGAACTA TCTCGCGGTC ATCAAGGTCG TCGGGATAGG CGGAGGCGGC
GTAAACGCCG TCAACCGGAT GATCGAAGTC GGGCTAAAGG GTGTCGAGTT CATCGCCATC
AACACCGACG CCCAGGCGCT GTTGATGAGC GATGCCGACG TCAAGCTCGA CGTCGGCCGT
GAACTCACCC GTGGCCTGGG GGCCGGTGCC GACCCGGAGG TCGGCCGCCA GGCCGCCGAG
GATCACCGCG AGGAGATCGA GGAGGTCCTC AAGGGGGCCG ACATGGTCTT CGTGACCGCG
GGTGAGGGCG GTGGCACCGG CACCGGTGGC GCTCCCGTCG TCGCCAACGT GGCCCGCTCG
CTCGGCGCGC TGACGATCGG TGTGGTGACG CGCCCATTCA CCTTCGAGGG CCGCCGCCGC
GCGACCCAGG CCGACACGGG CATCGACACC CTCCGCAATG AGGTTGACAC CCTCATCGTC
ATCCCGAACG ACCGCCTGCT CGCGATGACC GATCGCGACA TCAGCGTCCT GGACGCCTTC
CGCAGCGCAG ACCAGGTGCT GCTCTCCGGT GTCCAGGGCA TCACCGACCT CATCACCACC
CCTGGTCTGA TCAACCTCGA CTTCGCCGAC GTCAAGACGG TCATGTCGCA CGCCGGCAGC
GCCCTGATGG GCATCGGCCG GGCGCGGGGC GACGACCGGG CCACGGTCGC CGCCGAACAG
GCCATCGCCT CCCCCCTGCT GGAGGCCAGC ATGGACGGCG CACAGGGCGT CCTGCTGAAC
ATCTCCGGTG GGTCCGACCT CGGTCTGTTC GAGATCAACG CCGCGGCCGA GCTGGTCGCC
GACGCGGCCC ATCCCGAGGC GAACATCATC TTCGGTGCGG TGATCGACGA CGCCCTCGGC
GACGAGGTGC GGGTCACCGT GATCGCCGCC GGGTTCGACA CCGTGCAGGA CCGACGGACC
CGCACGCTCG CCACCCAGCG CCGACCACCG GGGCCGGGCG GCGCGGCCGG CGGCCCGCCG
CAGCCGGGGG CCCCCGGCCA GCCGGCGGCC CAGCCGGGCT CGGGCGGCGC GCCGAACACC
ACGGCGCTGC CGCCGATCCC GAACGTGCCG GCGCCGCCAC GGCCCGCGCC GGCCCACTCG
ACCTACCTGC CGCCTACGAG CCAGCAGGTC GGGCACTACG TGCCGGACCC GCTGCCCGAC
GATCGCGCCC CGAGCCAGGC CGGTGCGCCG GTGGTCGGGT CCGCCGGCGA CCAGCGGCCC
ATGGGCGGGC CGCCCCGCCG GGAGCACCCG GACACGGCCG GGGAGGGCGG CTACGCCCGC
TCCGCGCCGG CTGCCGGCGC ACCGGGCATC GGCCACCCGG CTCCCGGGCA CGCTGCTCCG
GCCCACGCCG CGCCGGCCCA TGCCGCCGCG GCCCAGGGCA TGCCCCGCGC CGGGCTCGGG
CACGCCGGAG CCGCTCCCGG CGGGGCCCCG GGCGCGCCGG GAGCCGCTCC GGCCGGCGGG
GCTCCGCCGC AGGCCGGCCG CGGCCCGGAG CCGGCCCGTC CCGGCCCGCG CCCGACCTAC
CCGCCGCGCC GCCCCGTCCG CCCGGTGGCC GACGACGACG AGCTGGACGT CCCGGATTTC
CTCAAGTAG
|
|---|
| Protein sequence | MAAPQNYLAV IKVVGIGGGG VNAVNRMIEV GLKGVEFIAI NTDAQALLMS DADVKLDVGR
ELTRGLGAGA DPEVGRQAAE DHREEIEEVL KGADMVFVTA GEGGGTGTGG APVVANVARS
LGALTIGVVT RPFTFEGRRR ATQADTGIDT LRNEVDTLIV IPNDRLLAMT DRDISVLDAF
RSADQVLLSG VQGITDLITT PGLINLDFAD VKTVMSHAGS ALMGIGRARG DDRATVAAEQ
AIASPLLEAS MDGAQGVLLN ISGGSDLGLF EINAAAELVA DAAHPEANII FGAVIDDALG
DEVRVTVIAA GFDTVQDRRT RTLATQRRPP GPGGAAGGPP QPGAPGQPAA QPGSGGAPNT
TALPPIPNVP APPRPAPAHS TYLPPTSQQV GHYVPDPLPD DRAPSQAGAP VVGSAGDQRP
MGGPPRREHP DTAGEGGYAR SAPAAGAPGI GHPAPGHAAP AHAAPAHAAA AQGMPRAGLG
HAGAAPGGAP GAPGAAPAGG APPQAGRGPE PARPGPRPTY PPRRPVRPVA DDDELDVPDF
LK
|
|---|
| |