| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5061 |
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| Symbol | |
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| ID | 5673397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6060068 |
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| End bp | 6060847 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243912 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001509327 |
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| Protein GI | 158316819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0210858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0392738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCA CCGAATCCGA GTCCCCCGAC ACCCGCCGCC GGGACCCGGC GTCCGAGGGC
ATCCGCCTGC AGAAGGTGCT GGCCTCCGCC GGCATCGGCT CTCGCCGGCA CAACGAGGAA
CTGATCGACT CCGGTCGCGT CCGGGTCGAC GGCGAGGTGG TCCGCGAGCA GGGCCGTCGG
GTCGACCCGG AGACGGCGGT GATCGAGGTC GACGGCGAGC GCGTCGTCAC CCGCACCGGG
CTGGTGCACC TGGCGCTGAA CAAGCCGCGC GGTGTGCTGT CGGCGATGTC CGACGACCGC
GGCCGGCCGA CCATCGCCGA CTTTCTCACC GAGTTCGGCT CCGTCGGCCT GTTCCACGTC
GGCCGGCTGG ACGGCGACAG CGAGGGCCTG CTGCTCGTCA CCAACGACGG CGATCTCGCC
CACCGGCTCA CCCACCCGTC CTTCGGCGTG CCGAAGACCT ACCTGGTCGA GATCAGCGGC
CCGGTCCGCC GCGACGTCCC GCGCCGGCTG CGCTCGGGGG TGACCCTCGA GGACGGCCCC
GTCTCGGTCG ACGCCGCCCG GATCGTCGAC GTCGCCGCGT CCCGGGTCAT GATGGAGCTC
ACCCTGCACG AGGGCCGCAA GCACGTGGTC CGCCGCATGA TGGAGGCCGT GGGGCACCCG
GTGCACCGCC TCGTCCGGGT CTCGTTCGGC CCGGTGACGC TCGGCACGCT GCGGGCCGGC
CGCGCCCGCC ATCTCACCCG GCACGAGGTG GGGGCGCTCT ACAAGGCGAC CGGGCTGTGA
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| Protein sequence | MNGTESESPD TRRRDPASEG IRLQKVLASA GIGSRRHNEE LIDSGRVRVD GEVVREQGRR
VDPETAVIEV DGERVVTRTG LVHLALNKPR GVLSAMSDDR GRPTIADFLT EFGSVGLFHV
GRLDGDSEGL LLVTNDGDLA HRLTHPSFGV PKTYLVEISG PVRRDVPRRL RSGVTLEDGP
VSVDAARIVD VAASRVMMEL TLHEGRKHVV RRMMEAVGHP VHRLVRVSFG PVTLGTLRAG
RARHLTRHEV GALYKATGL
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