| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5020 |
|---|
| Symbol | |
|---|
| ID | 5673358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6015026 |
|---|
| End bp | 6016072 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641243874 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509289 |
|---|
| Protein GI | 158316781 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.848752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGTGA GAGTGTTCGG GTGGGCGGCA GACGCCAGCG CCTGCGGGTA CTACCGGCTG
GGGCTGCCGC TGGAGGCTCT GAAGGCCCGC GGCCATCGCA CCCTCGTCTC CACCGTCCTG
CCGGCCGGGT GGCTGGACGC GGACATCATC GTCGGCCAGC GGGTGTGTAT GCCTGAGCCC
TCGCAGACCT GGCAGCGCCT GGCCCGGGAC GGTCATCTGC TCGTCTACGA GATCGACGAC
AACCTGTTCG GCCTGCACCC GACGAACCCA GGCCGCCGTC TGTTCGGCGA CTCGGCGGTG
CAGCAGCGCG TCCGCGATAA CGCCGCTGTC GCCTCGCTGG TCACGGTGAC CACCGAGGCT
CTCGCGCAGG TGATGCGCGA GATCAACCCC AACGTCGTGG TGTTGCCAAA CCGCATCCCG
GGCTGGCTGC TCATCCGCGA CCGGCCCCGC CGGCAGCGGC TCACGGTCGG CTGGGCCGGT
TCGGCCACCC ACTACGCCGA CATCGCGGAG ATCGCCTCCC CGCTGCGCCC GCACGTGTTC
AACCGCTCGA AGTCGCCGCT GCGCGTGCTG GAGGTGGCGG CCCTCGGCAT CCCCGCGGTG
GCCAGCGAGT ACGGCCCGTA CGAGGACTTT GTGCGCCCCG GCGAGACCGG GTTCCTGGTC
CGCTGTGACC ACGAGTGGGT CACCTACCTG CGGGAGCTGG CCGGCGATCG GGAGCTGCGC
GAGGTGCTGG TCGCCGACGT TCGCACCCTG GCCCTGCCGG CAGCCGACAT GGTGATCCTC
GGCGACGTCC TAGAGCACAT GGCCAGCAGT GAGGCTGTCG ACCTGTGGGG CCGAGCCCGC
GCTGCCGCCC GCCGCGGCGT GCTGGCCTCC CTGCCCGTGG TGCCCTACCC GCAGGGTCTG
GCTGAGGGCA ACCCGTTCGA GGCGCACGTG GAGGAGTGGA GCGACGCCCG CGCGCAGGCC
GTGCTGCCCG GGGTGGTCGC TCACGACGTC GACGGGGAGA TCGGCGTGTA CCTCGCCGGC
CCGGCCGAGG AGCCGGCATG CGCCTAG
|
|---|
| Protein sequence | MSVRVFGWAA DASACGYYRL GLPLEALKAR GHRTLVSTVL PAGWLDADII VGQRVCMPEP
SQTWQRLARD GHLLVYEIDD NLFGLHPTNP GRRLFGDSAV QQRVRDNAAV ASLVTVTTEA
LAQVMREINP NVVVLPNRIP GWLLIRDRPR RQRLTVGWAG SATHYADIAE IASPLRPHVF
NRSKSPLRVL EVAALGIPAV ASEYGPYEDF VRPGETGFLV RCDHEWVTYL RELAGDRELR
EVLVADVRTL ALPAADMVIL GDVLEHMASS EAVDLWGRAR AAARRGVLAS LPVVPYPQGL
AEGNPFEAHV EEWSDARAQA VLPGVVAHDV DGEIGVYLAG PAEEPACA
|
|---|
| |