Gene Franean1_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4997 
Symbol 
ID5673336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5994104 
End bp5994769 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID641243851 
ProductFHA domain-containing protein 
Protein accessionYP_001509267 
Protein GI158316759 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCC GGTCACATCG GGTCAGGCCC CTGTCGAGGA ACATTCCTGC CGCCGTTAGG 
GCGGCGGACC GAGCGGCCGG GCTCCCGCCT GCGGGCATCC GGCAGGAAGC GGACGAGACT
GTGTTCTGCA CGAGGTGCGG CCAGCAGAAC CCGTCCGACG CGCTGTACTG CGCGCGGTGC
GGGTCGCCTC TGGTGCGTCC GGGCGAGCCC GTGGCGCCGG AGCGACCCGC GGAGCAGACG
TCGACGCTCA ACCTGGCCGC CGCGCTCTCC GGCATCGAGG GTGACCACGT CGACGAGTCG
ACCGAGCGCG ACGCCGTCGC CGCCGTCGAC GCGCTTCCGC CCGGCTCGGC CCTGTTGGTC
GTCAAGCGAG GCCCGAACGC GGGCAGCCGG TTCCTTCTCG ACGCCGATCT CACCACCGTC
GGGCGCCATC CGGAGAGCGA CATCTTCCTC GACGACGTCA CGGTCTCCCG GCGGCATGCC
GAGTTCCACC GGTCGCCCTA CACCAAGGGA TTCTCCGTGC GTGACGTCGG CAGCCTGAAC
GGTACCTACC TGAACCGGGA GCGGATCGAC TCCGCGGAGC TCACCGGCGG CGACGAGGTC
CAGATCGGCA AGTTCCGCCT GGTCTTCCTG ACGGGCGCGA CCTATGGGGG GGTCGGGGTT
CGGTGA
 
Protein sequence
MSARSHRVRP LSRNIPAAVR AADRAAGLPP AGIRQEADET VFCTRCGQQN PSDALYCARC 
GSPLVRPGEP VAPERPAEQT STLNLAAALS GIEGDHVDES TERDAVAAVD ALPPGSALLV
VKRGPNAGSR FLLDADLTTV GRHPESDIFL DDVTVSRRHA EFHRSPYTKG FSVRDVGSLN
GTYLNRERID SAELTGGDEV QIGKFRLVFL TGATYGGVGV R