Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4908 |
Symbol | |
ID | 5673248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5893661 |
End bp | 5894146 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243763 |
Product | hypothetical protein |
Protein accession | YP_001509179 |
Protein GI | 158316671 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.417496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00174056 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCGGTG TGGAGCTGCT CGCCGTGGCG CTGGTGATGG CGGTCGGTGT CGTCGGTGTG GTCGTGCCGG TGATGCCCGG CCTGCTCCTC GTCTGGGGCG CCGGCGTGTG GTGGACGATC GCGGACGGCG GCGGCGCGGG CCGCTGGGCG GTGCTCGCGG TCATGAGCGC ACTGTTCGTC GCCGGCGCGC TGGCCAAGTA CGTGCTGCCG GGCCGGGCCG CGTCGGCCGC TGGCGCGCCG TTCTCGACGA TGCTCATCGG CGCGGTCTGC GCCGTCATCG GCTTCTTCGT GGTGCCGGTT CTCGGCCTGC TCGTCGGCGG GCTCGCGGGC ATCTACCTCG CGGAGCTCAC CCGCCTGCGC GACGCCCGGC GAGCCACCGC CTCGACCTGG GTCGCTGTCG TCGCCTTCGG TGTCGGGCTG CTCGTCGAGC TCGGTGCGGC CGTCGCGATG GCCGCGACCT GGGGCGTCGG CGAGCTCGTC AGCTGA
|
Protein sequence | MSGVELLAVA LVMAVGVVGV VVPVMPGLLL VWGAGVWWTI ADGGGAGRWA VLAVMSALFV AGALAKYVLP GRAASAAGAP FSTMLIGAVC AVIGFFVVPV LGLLVGGLAG IYLAELTRLR DARRATASTW VAVVAFGVGL LVELGAAVAM AATWGVGELV S
|
| |