Gene Franean1_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4908 
Symbol 
ID5673248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5893661 
End bp5894146 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content74% 
IMG OID641243763 
Producthypothetical protein 
Protein accessionYP_001509179 
Protein GI158316671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00174056 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGGTG TGGAGCTGCT CGCCGTGGCG CTGGTGATGG CGGTCGGTGT CGTCGGTGTG 
GTCGTGCCGG TGATGCCCGG CCTGCTCCTC GTCTGGGGCG CCGGCGTGTG GTGGACGATC
GCGGACGGCG GCGGCGCGGG CCGCTGGGCG GTGCTCGCGG TCATGAGCGC ACTGTTCGTC
GCCGGCGCGC TGGCCAAGTA CGTGCTGCCG GGCCGGGCCG CGTCGGCCGC TGGCGCGCCG
TTCTCGACGA TGCTCATCGG CGCGGTCTGC GCCGTCATCG GCTTCTTCGT GGTGCCGGTT
CTCGGCCTGC TCGTCGGCGG GCTCGCGGGC ATCTACCTCG CGGAGCTCAC CCGCCTGCGC
GACGCCCGGC GAGCCACCGC CTCGACCTGG GTCGCTGTCG TCGCCTTCGG TGTCGGGCTG
CTCGTCGAGC TCGGTGCGGC CGTCGCGATG GCCGCGACCT GGGGCGTCGG CGAGCTCGTC
AGCTGA
 
Protein sequence
MSGVELLAVA LVMAVGVVGV VVPVMPGLLL VWGAGVWWTI ADGGGAGRWA VLAVMSALFV 
AGALAKYVLP GRAASAAGAP FSTMLIGAVC AVIGFFVVPV LGLLVGGLAG IYLAELTRLR
DARRATASTW VAVVAFGVGL LVELGAAVAM AATWGVGELV S