| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4888 |
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| Symbol | |
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| ID | 5673228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5864651 |
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| End bp | 5867179 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243743 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509159 |
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| Protein GI | 158316651 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.355305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.171205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCG CCACGCTGCG GAGCCTGCTG GCCCGCAAGG TACGGCTTGT CCTGTCCGCG
CTCGCGGTCG TCGTGGGTGT CAGCTTCGTC ACCGGCACCC TGGTCCTCAC CGACACGCTG
AACCGGACGT TCGACACCCT GTTCACCGAC ATCAACAAGA ACGTCAGCGT CTCCGTGCGG
ACCGTCAACG CGGTCGGCAC GGGCGACCAG GCCGACCGGA AGCCGGTGCC CGCCACACTG
GTCCCCACCG TCGCCAAGGT GGACGGAGTC ACCGCGGCGA CCGGGACGGT CCGGGGCCAG
GCGGTCCTGA TCGACCCCGC GTCGGGCGAC CCGCTCAACA GCGGCGGCGC ACCGGGCATC
GGAACGAACT GGACCGGCGG CACCGCGACG GGGTCGGAGG AGATCGCCGA CGGCCGGCCA
CCGAACGGCC AGGAGATCGC GGTCGACAAG TCGACCGCGG ACAAACACCA CCTCACGCTC
GGCCAGCGGA TCTCGGTGCA GACCCGCCTC CAGCCCGAGG AGTTCACCCT CGTCGGCACC
TTCCGCATCG GCGGGCAGGA CAGCCTCGGC GGCGCCGCCG TCACCACGTT CGACACGGCG
ACGGCGCAGC GGCTGCTGCT CGCGCCCGAC CAGTTCACCT CGATCAGCCT CGCCGCCGCC
AACGGCGTCT CGCAGGAGCA GCTGCGGGAC AGGGTCGCCG CGGTGCTCCC CACCGGGGTC
GAGGCGATCA CCGGCACCCA GCTCGCCGAG GAGGGCGCGA GCGCGATCCA GGACGCCGTC
AGCGGGTTCT CGACCTTCCT GCTGGTCTTC GCCGGCATCG CGGTGTTCGT CGGCGCCTTC
ATCATCTTCA ACACGTTCAC GATGCTGGTC GCGCAACGCG TCCGTGAGCT GGCGCTGCTG
CGCGCGATCG GCGCGAGCCG GGCCCAGGTG CAGCTCTCGG TCCAGATCGA GGCCCTGATC
GTCGGCTTCA TCGGCGCCAC GGCCGGTCTC GCTCTGGGCG CCCTGCTGGC GATGGGGCTG
CGGGCGGCCG TCGGCGCGTT CGGGATCTCG CTGCCGTCCG GCCCGCTGGT CTTCCAGCCT
CGGACCTTCC TGCTCGCCTA CGGCGTCGGC CTGGTCATCA CCGGTCTCGC GGCGTTCGTG
CCGGCCCGCA AGGCGGCGTC GGTGCCGCCG GTGGCGGCGA TGCGCGAGAC GTACGTGCTG
CCCACCAGGT CGCTGCGCAC CCGGGCGCTC GGCGGCGGCG CGCTGACCGT GCTGGGAGTG
ATCTGCCTGG TGGCGGGCCT GGCCCGCGGG GAGAATCCGA ACACGAGCAT GGTCGGCGCC
GGCGCGGCGT TCGTCTTCCT CGGCATCGCC ACTCTCTCGC CGCTGCTGGC CCCGCCGATC
ACCCAGGTCG TGGGGATTCC GCTGCGCGCG ATGTTCGGGA CGACCGGCCG GCTCGGCCAG
GAGAACGCCA TCCGCAACCC GCGGCGCACC GCCTCCACCG CGTCAGCGCT GATGATCGGT
CTGGCCCTGG TGAGCGCGTT CGCCGTGCTC GGCCAGTCCA TCAAGGAGTC GGTACGCGAG
ACGGTGTCGG AGAGCCTGGG TGCCGACTTC TACATCGCCA CATCCAACTT GGCCCCCTTC
AGCCCGCAGG TGGCCGCGGG GCTCCAGGGC AAGCCAGGCG TGGCGGTCGC CACCGGCATC
CGGGGCGGGG CGGTCAAGAT CGGCGACACG GACTCGTCGG TCCTCGCGGG CGATCCGGCC
GGCCTGCTGC AGGTCCTCTC CATCAAGCAG GTGGACGGCG ACGTCAACGC GCTCGGCGCG
GGTTCCCTCC TGGTCGACGA GGCGACGGCG GCCGAGCGGG GGCTGCGGGT CGGCGCGCCC
GTCCCGGTCA CGTTCGCGGA CGGCCCGACC GAGCTGACCC TGGTGGGCAC GTACGAGAAG
AGCGCGATCG CCGGCCCCGC GATGATCGCG ACCAGCGAGT TCGAGAAGCA CTCGAACAAC
AACCTCGACC TGTTCGTGAT GCTCAAGCTG GCCGACGGCG CCGACCCGGC CGCGGTCCGG
GCCGAGATCG ACAAGGTGAT CAAGCCGTTC GGCAGCGTCG AGGTCCGCGA CCAGTCGGAG
TTCGTGGCCC AGCAGGAGCA ACAGGTCGAC CAGCTGCTCG GGTTCGTGTA CGTCCTGCTG
GCCCTGGCGG TGGTGATCGC CCTGTTCGGC ATCGTGAACA CCCTAGCACT CTCGGTGATC
GAACGCACCC GGGAGATCGG GATGCTCCGG GCGATCGGCA TGACCCGGCA ACAGATGCGG
ATGATGGTCA TCGTCGAGTC GATGATTATC TCGGTCTTCG GTGCGGTGCT CGGTGTGCTG
GTCGGCAGCT TCTTCGGCTG GGCGCTGACC GGGGCGCTGA AGAACCAGGG GGTGACGACC
TTCGCCTATC CCGTCGGAAC GATCATCGCC GTGATGATCG CCGGCGCCAT CATGGGCGTG
CTCGCCGCGG TCTTCCCGGC GCGTCGAGCC GCCAGGATGG ACATCCTGCG GGCGATCGCC
ACGACCTGA
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| Protein sequence | MLRATLRSLL ARKVRLVLSA LAVVVGVSFV TGTLVLTDTL NRTFDTLFTD INKNVSVSVR
TVNAVGTGDQ ADRKPVPATL VPTVAKVDGV TAATGTVRGQ AVLIDPASGD PLNSGGAPGI
GTNWTGGTAT GSEEIADGRP PNGQEIAVDK STADKHHLTL GQRISVQTRL QPEEFTLVGT
FRIGGQDSLG GAAVTTFDTA TAQRLLLAPD QFTSISLAAA NGVSQEQLRD RVAAVLPTGV
EAITGTQLAE EGASAIQDAV SGFSTFLLVF AGIAVFVGAF IIFNTFTMLV AQRVRELALL
RAIGASRAQV QLSVQIEALI VGFIGATAGL ALGALLAMGL RAAVGAFGIS LPSGPLVFQP
RTFLLAYGVG LVITGLAAFV PARKAASVPP VAAMRETYVL PTRSLRTRAL GGGALTVLGV
ICLVAGLARG ENPNTSMVGA GAAFVFLGIA TLSPLLAPPI TQVVGIPLRA MFGTTGRLGQ
ENAIRNPRRT ASTASALMIG LALVSAFAVL GQSIKESVRE TVSESLGADF YIATSNLAPF
SPQVAAGLQG KPGVAVATGI RGGAVKIGDT DSSVLAGDPA GLLQVLSIKQ VDGDVNALGA
GSLLVDEATA AERGLRVGAP VPVTFADGPT ELTLVGTYEK SAIAGPAMIA TSEFEKHSNN
NLDLFVMLKL ADGADPAAVR AEIDKVIKPF GSVEVRDQSE FVAQQEQQVD QLLGFVYVLL
ALAVVIALFG IVNTLALSVI ERTREIGMLR AIGMTRQQMR MMVIVESMII SVFGAVLGVL
VGSFFGWALT GALKNQGVTT FAYPVGTIIA VMIAGAIMGV LAAVFPARRA ARMDILRAIA
TT
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