| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4877 |
|---|
| Symbol | |
|---|
| ID | 5673217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5850739 |
|---|
| End bp | 5851722 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641243732 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001509148 |
|---|
| Protein GI | 158316640 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.362422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGCC CGCCGGTGAT GTACCGTCCC GCCGACTCGA ACGGATCAGG CCCGGTCGAC
CGCGCACGGC GTCGCCCGGT CGCCATGACC ACCCGGGAGG TGGCCCGCGT GGGCCGACCG
CAGGCGGCGG AGGCACCGAC CGGTGCCGGG CGGAGCGGAC CGGACCGGCC GGGCACCCCG
ACCGCGCCCC ATCCGGTGGA CGGCGTCGGC GAGCCCGACG ACACGGACGC CGCCGGAGAG
ATCACCCGGA TGTTCTGGGC GCTGCACGAA GGGCTGCCAC GCCAGTCCGC CGGGTCGGAC
GCGACGACCC GGCGGCTGCT GGAGCTCGCC GGCCCGCTGC CGCACCGACC GCGCGCGCTC
GACATCGGAT GCGGGCCGGG CCGGGCGGCG CTCGTGCTCG CCCAGGCCGC CGGCGCGGAC
GTCGTCGCGG TCGACCTGCA CCGCCCGTTC CTGACCCAGT TGGCGCACTC GGCCACGGCC
GCGGGGACGC GCGACCGGAT CCGGCCCGTC GTCGCGTCGA TGACCGATCT GCCCTGCCCG
GACAGCGCCT TCGACCTCGT CTGGTCGGAG GGCTCGGCGT ACATCATGGG CTTCGCCGCC
GCGCTGCGGG CATGGCGGCG GCTGCTGGCA CCAGCGGGGA CCCTCGTCGT GTCCGAACCG
GTCTGGACGG TCGACGACCC GGCGCCCCCG GTGAAGGAGT TCTGGGACGC CGCCTACCCC
CTGCGCTCGG CCGAGGCGAC GGCGGACATG GCCCGCGCGG CGGGCTACGA GGTGGTCGCG
GCCTTCGAAC AGCCGGACAG CGACTGGTGG GCGGAGTACT ACGACCCGTT GACCGCCCGG
CTCGACCGGG CGGAACGGGC CGGTACCGCG ACGGCGGACG ACCGAGCCGC CCTGGACGCC
TGCCGGGCCG AGATCACGCT CCGCCGGGCC CACGGTGCCG ACTATGGCTA CCTGGGGTTC
GTCCTCCGCC CGCGGCGGGA CTGA
|
|---|
| Protein sequence | MAGPPVMYRP ADSNGSGPVD RARRRPVAMT TREVARVGRP QAAEAPTGAG RSGPDRPGTP
TAPHPVDGVG EPDDTDAAGE ITRMFWALHE GLPRQSAGSD ATTRRLLELA GPLPHRPRAL
DIGCGPGRAA LVLAQAAGAD VVAVDLHRPF LTQLAHSATA AGTRDRIRPV VASMTDLPCP
DSAFDLVWSE GSAYIMGFAA ALRAWRRLLA PAGTLVVSEP VWTVDDPAPP VKEFWDAAYP
LRSAEATADM ARAAGYEVVA AFEQPDSDWW AEYYDPLTAR LDRAERAGTA TADDRAALDA
CRAEITLRRA HGADYGYLGF VLRPRRD
|
|---|
| |