| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4868 |
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| Symbol | |
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| ID | 5673208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5842040 |
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| End bp | 5843050 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243723 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001509139 |
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| Protein GI | 158316631 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.145706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0727034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACGGT TGCCCAACCC GCGCAGGCTC GCCACGTCTG TGCACCATCG GCGCACACGC
ACGGTCGAGG ACAGTCGGAT GCCCCTCACC GAGCACCTGC GCGAGCTGCG GAACCGGCTG
GCCAAGGCGC TGATCGCCTT CGCCGTCGCC ACGATCGTCT GCTTCATCGT CGAGCCGAAT
ATTTTCCAGT GGCTGATCGA TCCGTACTGC GCCCTACCCG CGGACAAGCG CGGTGACTTC
AGCAGCGGCG ACGGTTCGTG CCGGCTCTAC TTCTTCGGCA TTCTCGACGC CTTCACGATC
CGGCTGAAGA TTTCGATGAT CTCCGGGGCG GTGTTCTCGG CACCGGTCTG GCTCTACCAG
CTCTGGTCCT TCATCACACC CGGCCTGCAC CGCCACGAGC GCCGGTGGTC GCTGACGTTC
GTCTGCTCGT CGCTGGTGCT CTTCGCCGCC GGTGGCTTCT TCGCCTACAT CACGCTCGAG
ACCGGCCTGA ACTTCCTGCT CGGCTTCGGC GGCGACGGCC TCGTCAGCAT CCTCGACGGC
AGCAAGTACC TCAGCTACGT CATCGCGATG CTGCTCGTGT TCGGGCTGTC GTTCGAGGTG
CCGCTGCTGG TCACGATGCT GAACCTCGCC GGTCTCGTCA CCACGGCGAA GCTGCGGTCC
TGGCGGCGGG CCGAGATCTT CCTCGTGTTC GTGTTCGCGG CGGTGGTGAC GCCCAGCCAG
GACCCGTTCA CCATGCTCGC GCTGGGCCTG CCGATGGTCA TCCTCTACGA GGTGGCGCTG
ATCATCGGTT GGCTCAACGA CCGGCGCAAG GCCCGCCGGG GGGACACGTC CCCCTACGCC
GGCCTGGGCG ACGACGAGAC CTCCTCCCTC GACTTCGACG AGTCCGCGGG TGAGCGGGTC
CCCCCGGCGC CGCGTACCGC CGACCCGCGG GCTACCGCGC AGGGCGACGC GGTCGCGGCC
GGAGCCTCCG GCGCCGCGAC GGCCGACGGC TCCCACGGCG ACATCACCTG A
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| Protein sequence | MPRLPNPRRL ATSVHHRRTR TVEDSRMPLT EHLRELRNRL AKALIAFAVA TIVCFIVEPN
IFQWLIDPYC ALPADKRGDF SSGDGSCRLY FFGILDAFTI RLKISMISGA VFSAPVWLYQ
LWSFITPGLH RHERRWSLTF VCSSLVLFAA GGFFAYITLE TGLNFLLGFG GDGLVSILDG
SKYLSYVIAM LLVFGLSFEV PLLVTMLNLA GLVTTAKLRS WRRAEIFLVF VFAAVVTPSQ
DPFTMLALGL PMVILYEVAL IIGWLNDRRK ARRGDTSPYA GLGDDETSSL DFDESAGERV
PPAPRTADPR ATAQGDAVAA GASGAATADG SHGDIT
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