Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4862 |
Symbol | cobN |
ID | 5673202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5831366 |
End bp | 5835166 |
Gene Length | 3801 bp |
Protein Length | 1266 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641243717 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_001509133 |
Protein GI | 158316625 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.114113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.358132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACA CACCGCCGGG CGGCGTCCCG GCCGAGCCGG TGCTGGCCGC TGACCCGGTG CTGGCCCTGG TGTCCACCGC CGACACCGAG CTGCTCGCCG CGCGGGCCAG CGGCGTGCCC TGGCGGGTCG CCAACCCGGC CCGGCTCGAC GCGGCGGAGG TGCCGGCGTT CCTCGCCGGG GCCGACGTGG TGGTGGTGCG CCTGCTCGGC GGTGAACGGG CCTGGGCCGA GGGCCTCGCC GCGACGGTGG CGAGCGGGCT GCCGGTCGTC GCCCTCGGCG GCGAGTCGAC ACCGGACGCG GCGCTGATGG CGCGCGGCAC CGTCCCGGCC GGCGTCGCCA CCGAGGCGCT GGCCTACCTG ACCGAAGGCG GCGTCGGAAA CCTCGCCGAG CTCTACCGCT TCCTCTCCGA CACGCTGCTG CTCACCGGGC TGGGGTTCGC CCCGCCGGTG GAGCTGCCCG CGCACGGGCC GCACGGCGAC CGGGTGGCCA AGCCGGACCG CCCGACCGTC GGCGTCGTGT TCTACCGGGC GCACGCCACC TCCGGGAACA CGGCGTTCGT CGACGCGCTG TGCGACGCGC TCGAAGGAGC CGGGGCCAAC GCCCGTCCGG TGTTCTGCTC GACGCTGCGG GGCGCCGCGG CCGGCGGAGT GATCGACGAC CTGGCCGGCG TCGACGCGCT CGTGGTGACC GTGCTCGCCG CCGGCGGCAC CCGGGCGTCG GACGCGTCCG CCGGCGGCGA CGAGGACGCC TGGGATGTCG GCGCGCTCGC CGCGCTCGAC GTCCCGGTGG TGCAGGGGCT GTGCCTGACC TCGTCGCGCG CCGTCTGGGC GGACAGCGAC GCCGGTCTGT CCCCCATGGA CGCGGCGATG CAGGTCGCCA TCCCCGAGTT CGACGGCCGG ATCATCACCG TCCCGTTCTC GTTCAAGGAG CAGGGGGTGG ACGGCGTCCC GGTGTACGTG GCCGATCCGG AGCGCACCGC CCGGGTCGCC GGGATCGCGT CCCGACTGGC CGGGCTGCGG CACACCCCGG CCGCCGAGAA GAAGATCGCG ATCGTGCTCT CGTCGTACCC GACGAAGCAC TCGCGGGTCG GTAACGCCGT CGGGCTCGAC ACCCCGGCGT CGGCTGTGCT GCTGCTCGAC GCGCTGCGCG CCGCCGGCTA CGACCTCGGC GACGGCTACC CGGGCGAGGA CCTCCGCTCC GCCGACGGCG GGCCGGGCGA GATCAGGCCG GACGCCGCGG CCGGAGACGC CCTGATCCAC GCCCTGATCG CCGCCGGCGG GCACGACGTC GAGTGGCTGA CCGCGGAGCA GCTCGCCGCG GCGCCGGCGC GGGTGCCGGC GTCAACCTAC GAGGGATGGT TCGCCCGCCT GCCGGAGTCG CTGCGCGGCG CCATGACCGA GCACTGGGGC CCACCGCCGG GCTCCCTCTA CGTCGACGAC GGCGCTGCCG GCGACGGGCG CGGGCGCGGG CCGGCGGCGG AGCCGGCGAT CGTGCTGGCC GCGCTGCGCT TCGGCAACGT CGTCGTGATG ATCCAGCCGC CGCGGGGGTT CGGGGAGAAC CCGGTGGCGA TCTACCACGA CCCGGACCTG CCGCCGTCCC ACCACTACCT GGCGGCCTAC CGCTGGCTGG ACGAGGCCTT CGGCGCGGAC GCCGTCATCC ACCTCGGCAA GCACGGGACG CTGGAGTGGC TGCCCGGCAA GGGCCTGGGG CTGTCCGCGG GGTGCGCGCC GGACGCCGTC CTCGGCGACC TGCCGTTCGT CTACCCGTTC CTGGTCAACG ACCCGGGGGA GGGGACGCAG GCCAAGCGCC GCGCCCACGC CGTGATCGTC GATCACCTCG TACCGCCGAT GGCCCGCGCC GACTCCTACG GCGACATGGC CAAGCTGGAG CAGCTCCTCG ACGAGTACGC GACGCTCGCC GCGCTCGACC CGGCCAAGCT GCCCGCCGTA CGCGCCCAGA TCTGGACGCT CATCCAGTCC GCCCAGCTGC ACCACGACCT CGGGCAGGCC GACCGCCCCA GCGACGCCGA GTTCGACGAC TTCCTGCTGC ACGTCGACGG CTACCTCTGC GAGGTCAAGG ACACCCAGAT CCGCGACGGC CTGCACATCC TCGGCGTGGC CCCGGCGGGG GAGGCGCGGA CGAACCTGGT CACCGCGATC CTGCGCGCCA ACCAGATGTG GGCGGGCCAG GCCGGGGCGG TACCCGGGCT GCGCGCGGCG CTGGGCCACA CCGAAGGCGA CACCGAGGCG TCCCGGACGC AGGTCGACGC GTTCGAGCAG ACCGCCCGGT CGCTGGTGGC CGCCCTCGAG GACGCCGGCT GGTCGCCGGC CGCCGTCAGC TCCGTGGTGG CCGGGCAGTC GGCCGAGGCG GTGCCGGCCG CCGCGCGGGC CGAGGTCGAG CGGGTCCTCA CGTTCGCCGC CACCGAGGTC GTCCCCCGGC TCGCCCGCAC CCCGGACGAG ATCGTTAACA CCGTGCGGGC CCTCGACGGG CGGTTCGTCC CGCCCGGCCC GTCCGGCTCG CCGACCCGTG GGCTCGTCAA CGTGCTGCCC ACCGGGCGCA ACTTCGCCTC CGTCGACCCG AAGGCCATCC CGTCCCGGCT CGCCTGGGAG ACCGGTCGCG CGCTCGCCGA CTCGCTGATC GAGCGCTACC TCGCCGACAC CGGCGGCTAC CCGGCCTCGG TCGGGCTGAC CGTCTGGGGG ACGTCGGCGA TGCGCACCCA GGGCGACGAC ATCGCCGAGG TGCTCTGGCT GTTGGGCTGC CGTCCCACCT GGGACGACGC GTCCCGGCGG GTCACCGGCT TCGAGGTCGT CCCGGGCGCG GAGCTCGGGC GTCCGCGGGT GGACGTGGTG GTGCGGATCT CCGGATTCTT CCGGGACGCG TTCCCGCACG TCGTGGCCCT GCTCGACGAC GCGGTGCGGG CGGTGGCGGT GCTCGACGAG CCCGACGACG TCAACGCGCT GGCCGCTCAC GTCCGGGCCG ACCTGGCGGC GCTCGGGGCC GTCCCGACGG TCGGCGGGCG CGGCGGCACC GCCGACCCGG CCGCGCTGCG CCGCGCGACG ACGCGGATCT TCGGTTCGAA GCCGGGCGCG TACGGAGCCG GCCTGTTGCC GCTGATCGAC TCCCGGCAGT GGCGCTCGGA TGCCGACCTG GCCGAGGTGT ACGCGGTCTG GGGCGGCTAC GCCTACGGGC GCGGCCTGGA CGGCGCCGAG GCCCGCGCCG ACATGGAGAC CGCGTTCCGC CGCATCCAGA TCGCGGTGAA GAACCAGGAC ACCCGCGAGC ACGACCTCGT CGACTCCGAC GACTACTTCC AGTACCACGG CGGGATGGTG GCCGCCGTCC GCGCGCTCAC CGGCACGTCG CCAGCCGCCT ACGTCGGTGA CAGCGCGCTG CCGGACGCCG TCCGCACCCG CACCCTGCAG GAGGAGACCC ACCGGGTGTT CCGCGCCCGG GTGGTCAACC CGCGCTGGAT CGCGGCGATG CGCCGTCACG GCTACAAGGG CGCGTTCGAG CTGGCCGCGA CGGTCGACTA CCTCTTCGGC TACGACGCGA CCGCCGGTGT CGTGCAGGAC TGGATGTACG AGTCGCTGGC CGCCTCCTAC GTCTTCGACG CCGAGACCCG CGAGTTCCTG CGGACGTCCA ACCCGTGGGC ACTGCGCGGC ATGACCGAGC GCCTGCTGGA GGCCGCGGAG CGTGGCCTGT GGGAGGCTCC TCAGGAAGCC ACGCTGGCCG GCCTGCAGTC CACTTACCTT GAACTGGAAG GTGATCTGGA GGCCGCGGGC GACGGAGAGA GCGCCGGATA A
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Protein sequence | MPNTPPGGVP AEPVLAADPV LALVSTADTE LLAARASGVP WRVANPARLD AAEVPAFLAG ADVVVVRLLG GERAWAEGLA ATVASGLPVV ALGGESTPDA ALMARGTVPA GVATEALAYL TEGGVGNLAE LYRFLSDTLL LTGLGFAPPV ELPAHGPHGD RVAKPDRPTV GVVFYRAHAT SGNTAFVDAL CDALEGAGAN ARPVFCSTLR GAAAGGVIDD LAGVDALVVT VLAAGGTRAS DASAGGDEDA WDVGALAALD VPVVQGLCLT SSRAVWADSD AGLSPMDAAM QVAIPEFDGR IITVPFSFKE QGVDGVPVYV ADPERTARVA GIASRLAGLR HTPAAEKKIA IVLSSYPTKH SRVGNAVGLD TPASAVLLLD ALRAAGYDLG DGYPGEDLRS ADGGPGEIRP DAAAGDALIH ALIAAGGHDV EWLTAEQLAA APARVPASTY EGWFARLPES LRGAMTEHWG PPPGSLYVDD GAAGDGRGRG PAAEPAIVLA ALRFGNVVVM IQPPRGFGEN PVAIYHDPDL PPSHHYLAAY RWLDEAFGAD AVIHLGKHGT LEWLPGKGLG LSAGCAPDAV LGDLPFVYPF LVNDPGEGTQ AKRRAHAVIV DHLVPPMARA DSYGDMAKLE QLLDEYATLA ALDPAKLPAV RAQIWTLIQS AQLHHDLGQA DRPSDAEFDD FLLHVDGYLC EVKDTQIRDG LHILGVAPAG EARTNLVTAI LRANQMWAGQ AGAVPGLRAA LGHTEGDTEA SRTQVDAFEQ TARSLVAALE DAGWSPAAVS SVVAGQSAEA VPAAARAEVE RVLTFAATEV VPRLARTPDE IVNTVRALDG RFVPPGPSGS PTRGLVNVLP TGRNFASVDP KAIPSRLAWE TGRALADSLI ERYLADTGGY PASVGLTVWG TSAMRTQGDD IAEVLWLLGC RPTWDDASRR VTGFEVVPGA ELGRPRVDVV VRISGFFRDA FPHVVALLDD AVRAVAVLDE PDDVNALAAH VRADLAALGA VPTVGGRGGT ADPAALRRAT TRIFGSKPGA YGAGLLPLID SRQWRSDADL AEVYAVWGGY AYGRGLDGAE ARADMETAFR RIQIAVKNQD TREHDLVDSD DYFQYHGGMV AAVRALTGTS PAAYVGDSAL PDAVRTRTLQ EETHRVFRAR VVNPRWIAAM RRHGYKGAFE LAATVDYLFG YDATAGVVQD WMYESLAASY VFDAETREFL RTSNPWALRG MTERLLEAAE RGLWEAPQEA TLAGLQSTYL ELEGDLEAAG DGESAG
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