Gene Franean1_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4830 
Symbol 
ID5673171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5769256 
End bp5769780 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content75% 
IMG OID641243686 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001509102 
Protein GI158316594 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0306805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0379281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CGGACAGCGC CGCCTCGCCG GACGGATCGG CGCCGCAGGG ATACGGCCCC 
GGCCGGGGCC CCGGCGCGCT CGCGCTCACC GACGGTGAGC TGAGCCGGAT CCTCGCCACC
CACCAGATGG GCGCGCTCGC GTCGAACAAG CGGGACGGCC ATCCGCACCT GTCGACGGTC
GCCTACAGCT GGGACCCCAC GGAACGCACG ATCCGGATCA GCACCACCGA GGACCGGCTG
AAGGTGCGCC TGCTGCGGCG TGACCCGCGC GCGGCGCTGT ACGTGACCGC GCCCGACTAC
CTGTCGTTCG CGGTGGCCCA GGGCACGGTC GAGCTCTCCG CGGTGAGCTC GGTGCCGGGC
GATCCCGCCG GGCGCGAGCT GCTCGCCCTG CAGCCACCGT TCGCCGACCC GGCGCTGGAG
GCCGAGTTCC TGCGGAACAT GGCGGCCGAC CGCCGGCTGG TCATCCGGCT GCGCGTCGGC
CGGCTGTACG GCACGGCGCT CGACAGTCCC GCGCCACCCG CCTGA
 
Protein sequence
MTDPDSAASP DGSAPQGYGP GRGPGALALT DGELSRILAT HQMGALASNK RDGHPHLSTV 
AYSWDPTERT IRISTTEDRL KVRLLRRDPR AALYVTAPDY LSFAVAQGTV ELSAVSSVPG
DPAGRELLAL QPPFADPALE AEFLRNMAAD RRLVIRLRVG RLYGTALDSP APPA