| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4810 |
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| Symbol | |
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| ID | 5673151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5742075 |
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| End bp | 5743742 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243666 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509082 |
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| Protein GI | 158316574 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.502996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGT CCGGTGTGGA CTTCGCTGTC ACCGATGAGG TGCGCGACAG GTCCGCGGGT
GCGGGGCTGT GGTTCGGCGG GCGGTCCGGC GCCCGTCGCG GAAGGAACCA GATGACGAAG
GCCCAGGCCA CAGAGATGGA TCCAGCCGGC GCGAGCGGCG GGGACGGCGA TGCCCGGGCC
ACCGGGGCAC CGCCGTCCAG CACCGTGGCG GCGGTGGACG AGGCGGGCGT CGATCCGCGG
CGGTGGCGGG CGCTGCCCGT GATCCTGATC GCCAGCTTCA TGAGCCTGTT CGACGTCTTC
GTCGTCAACG TCGCGGCACC GAGCATCGAA TCGGACCTGC ACGCGTCCAA CGCCGGGCTT
GAGCTGGTCG TCGGCGGCTA CTCGTTCACC TACGCCGCCG CGCTGGTCAC CGGCGGCCGG
CTGGGTGACC GGTTCGGCCG CCGCCGGATC TACCTGCTCG GGATGGCGGT CTTCACCGCC
GCGTCGGCCC TGTGCGGGCT CGCGCCCAAC GAGGCGGTGC TGATCGGCGG CCGGCTGCTG
CAGGGCGCCG GTGCCGCGGC CATGGTGCCC CAGGTGCTCG CGCTGATCAG CGTGACCTTC
CCGCCGGCCG AGCGGCCGCG GGCGTTCGCG TTCTTCGGCG TGACGATCGG GCTCGGCGGG
GTCTGCGGTC AGGTGCTCGG CGGGGTGCTG CTCGACCTCG ACATCTTCGG CCTCGACTGG
CGGCCGATCT TCCTGGTCAA CGTGCCGATC GGGCTGGCGG CGCTCGTCGG GGCGCGGCGG
CTGGTCCGCG AGTCGCGCGC GGCTCGAGCG GAGCGGCTCG ACCCGGTCGG GCTGGGCACG
CTGACCCTCG GCATCGGGCT CGTCCTCATC CCGCTCACCC TCGGCCGCGA CGAGGGCTGG
CCGCTGTGGA CGTGGCTCGC GCTCGCCGCT GGGATCGTGG TGCTCGGCGG GTTCGGGGCC
TGGGAGGCCC GGCTGGCGCG CTCCGGCGGG CATCCGATCA TCCCGCCGGC CGTGGTGCGG
TCCCGGGCGG TCGTCGGCGG CATGGTGATG AGCGCGGGGT ACTTCTTTTT CTTCGGCAGC
TTCCTACTCG CCCTGACGAT CTTCCTGCAG GTGGGCCAGC ACCGCTCCCC GCTGAACGCC
GGGCTGATGT TCGCGCCGCT CGGCGTGGTC TTCGCGTTCT CCTCGCTGGC GGCGCGCCGG
CTGGTCACCG TGTACGGGCC GCGGGTGCTG ACCGCCGGGG CGCTCACCAC CGCCCTGTCC
CTGGTCGGGG TCGCGGTGGC GGTGTCGGTC GAGGGCACCG GCATGACCGC CTACGAGCTC
ACCCCGCTGC TGATGCTCGC CGGCATCGGC AACGGCCTGG TGATCCCGGC CCTGGCCGCG
AGCGTCATGG CGGCCGCCCC ACCCGACATC AGCGGGACGG TGAGCGGCGT CCTCACCACC
ACGCAGCAGT TCGCCTCGGC GTTGGGCGTC TCCGGCGTGG GGGCACTCTT CTTCGCCGAG
ACCGCACGCA GCGGCGCGGA CGCCGGCCTC TTCGCCGCCG TCATCTGCGG CCTCATCTCG
GTCGGCGCGG CCTTCCTGGG CTCCCTGGTT CTCCGCCGCC CACCCACGGC ACTGGCCGTC
GCGGGGGCCG CCGTCGCCGG GGCTGCCGTC GCGGCATCCG CGGACTAG
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| Protein sequence | MPTSGVDFAV TDEVRDRSAG AGLWFGGRSG ARRGRNQMTK AQATEMDPAG ASGGDGDARA
TGAPPSSTVA AVDEAGVDPR RWRALPVILI ASFMSLFDVF VVNVAAPSIE SDLHASNAGL
ELVVGGYSFT YAAALVTGGR LGDRFGRRRI YLLGMAVFTA ASALCGLAPN EAVLIGGRLL
QGAGAAAMVP QVLALISVTF PPAERPRAFA FFGVTIGLGG VCGQVLGGVL LDLDIFGLDW
RPIFLVNVPI GLAALVGARR LVRESRAARA ERLDPVGLGT LTLGIGLVLI PLTLGRDEGW
PLWTWLALAA GIVVLGGFGA WEARLARSGG HPIIPPAVVR SRAVVGGMVM SAGYFFFFGS
FLLALTIFLQ VGQHRSPLNA GLMFAPLGVV FAFSSLAARR LVTVYGPRVL TAGALTTALS
LVGVAVAVSV EGTGMTAYEL TPLLMLAGIG NGLVIPALAA SVMAAAPPDI SGTVSGVLTT
TQQFASALGV SGVGALFFAE TARSGADAGL FAAVICGLIS VGAAFLGSLV LRRPPTALAV
AGAAVAGAAV AASAD
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