Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4779 |
Symbol | |
ID | 5673120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5705853 |
End bp | 5706542 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641243635 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001509051 |
Protein GI | 158316543 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCG GACCAGGAGC CGAGCACCCG GAATCACGCG ACTCGTCCCC GGCAACGCCT GCGCCGGCGC CGGCGCCGGC GCCCAGGCTG GCACCACTGC CGTTCGAGAA GTGGGACGAC GAGACCAGGT CCATCCTCCT GCGCTACCTG CGGCGGCCCG AGCTCTACCT GTCGGGCGCC CCGGACGCCC CCCCGATGCC GAAGGCGCTC GGGCTGTTCG CCCACCACGT CCAGCTGAGC GAGACCTTCC TCGCGTTCAC CGATCTGTTC GCCGGCGAGC ACGCCACGCT TGACCCTCGG CACCGCGAGC TTCTCATCCT GCGGGTAGCG TGGCGCACCC GCTCCGGCTA CGAGTGGGCC CAGCACACCC GGATCGGGAT GCAGGCCGGT CTCACCACCG AGCAGCTCTA CGCCATCCCG CACGGAGCCG AGGCCGAGGT GTGGACGCCG GTCGAGCGTG CCCTGCTGGC TGCGACCGAC CAGATGATCG ACCAGTCGCG CGTCGGCGAC GACACCTGGC AGCTGCTGGC CTCCCATTTC GATGCGGGGC AGCTGCTCGA GCTGTCCTTC GTCGTCGGCG GCTACCTCTG TCTCGCGGCG GTCCTCAACA GCGTCGGCCT GCAGCCGGAC CCGCCGACCG AACCGGTCGA CGCACCGACG CTCCCTGCAG AGCGTGACCC GTCCGCCTGA
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Protein sequence | MATGPGAEHP ESRDSSPATP APAPAPAPRL APLPFEKWDD ETRSILLRYL RRPELYLSGA PDAPPMPKAL GLFAHHVQLS ETFLAFTDLF AGEHATLDPR HRELLILRVA WRTRSGYEWA QHTRIGMQAG LTTEQLYAIP HGAEAEVWTP VERALLAATD QMIDQSRVGD DTWQLLASHF DAGQLLELSF VVGGYLCLAA VLNSVGLQPD PPTEPVDAPT LPAERDPSA
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