| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4655 |
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| Symbol | |
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| ID | 5672998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5554002 |
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| End bp | 5555609 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243513 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001508929 |
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| Protein GI | 158316421 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCTG CTTCGAGGGG GGCCACGCGG CGCCAGGGTC CGTGCCGGAC CGGGGCGGGC
CACGGTGGGG ATACGGCCGG CTGTTGCGAT GCCGGGGATC TGCTGGACTC GTTGGGCGAG
GTGGTGTTCC GGACCGACGC GGAGGGTTGT TGGACGTATC TGAACCGGGC GTGGACGACC
CTGACCGGCT TCGATGTCGT GGCCAGCCTG GGTGCCCAGT TCCTGGACTA TGTTCACCCG
GACGAGGTGG AGGCCACGGT CGCGTTGTTC ATGGGTGTCG TCGCGGGGGG TGCCGATCAC
TGTCACCACG AGACCCGCTA CCGCACCCGG GACGGCAGCT ACCGGCGGGT CCAGATCAGG
GCGACCGTCC TGCGGGACGC GGCGGGCGTG GTGGTCGGCA ACACCGGGAC GATCCTGGAC
GTCACCGCCG CCCGCCGTGA CGCGCAGACC GTCGGGGAAC ACGCCGCGCT GCTGGAGTTG
GTGTCCGCAG GGGTACCCGC CGGCGAGCTG CCGGTTGGGG TGGCGGTGTA TGACGCCGAC
CTGCGGCTGT GGCGTGGTTC ACCGGTCCTG GACCAGATCG CTCGTGTGCC CCAGCGTGTG
GGGGATCGTC TTGCCCAGCT GGCCGAACGG CTCTCGCCGG CGGCCGGGCC GCGGCAGCGC
TCGCTGGGTG GCGAGTGGGG CATGATCGCG GCTGCGCTGC GTACCCACCA CGCCCAGGTC
GGTGATCTCG ACCTCGTGGG GGAGCGCGGT ACCGGCCGGT CGATGCGGGT CACAGTGATC
CCATACGTAC GGGGCGGTGA GGAGATGCTC GCGCTCGTCT TCACCGACAT CACCGACCTG
CGCCGCGCCG AGCGCGAGCT GCGCCGGCTC TACGAGCAGG CGGAACGGAG CCGGGCCTGG
CTGGCGGCGA GCACCGAGAT CACGACCAGC GTGCTGGCCG CCCCGGATCC ATGCGAGGCT
CTCGGTCGCG TCGCGCGGAT GGGCCGGCGG ATGGCCGCCG CGGACCTGTC CCTGGTCGCC
GTGCCCGACG AGCACGGCAC CCTGGTCGTG ACCGCCGCCT CCGTAGCCCC CGACCTTCCC
GCCGACGCCG ACGCCCTACC AGGGCTGACC GTCACTCTCC GCGCCGCGCC AGGAGCCGGC
GTGCTCAACG CAGGCCACGC CGTTGTCCTG GACGGCCTAC AGCTGCGGGG GAACCGGGTC
GTCCACGCGC CGACGCTGCC CCTCGCCGCG GCGCTGGCCG TGCCGCTACG AATCGCCGGG
CATCAGGCGG CGATCCTTCT CCTCGCCCAC CGGAGCAGCA CGGCTCGCCT TCCGGCGCGC
GACATCGAAC TGGTCGAGGG CTTCGCCGCC GACGCCGCGC TCGCCCTCGA ACTAGCCCAG
GCACACCAGG AACGTGCCCG CCTGGCGGTC TTCGAGGACC GCGACCGCAT CGCCCGCGAC
CTCCATGACC TGGTCCTCCA ACGGCTGTTC GCCATCGGCC TGCACCTGCA GTCCCTAGCC
CGCGCCGCCG GCGACATGAT CGGCGCACGA CTCACCGCGG CCATCGACGC CCTCGACCAG
ACCATCGAGG AAATCCGCCG CACAATCCTG CAGGTACAAC CCTCATGA
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| Protein sequence | MTSASRGATR RQGPCRTGAG HGGDTAGCCD AGDLLDSLGE VVFRTDAEGC WTYLNRAWTT
LTGFDVVASL GAQFLDYVHP DEVEATVALF MGVVAGGADH CHHETRYRTR DGSYRRVQIR
ATVLRDAAGV VVGNTGTILD VTAARRDAQT VGEHAALLEL VSAGVPAGEL PVGVAVYDAD
LRLWRGSPVL DQIARVPQRV GDRLAQLAER LSPAAGPRQR SLGGEWGMIA AALRTHHAQV
GDLDLVGERG TGRSMRVTVI PYVRGGEEML ALVFTDITDL RRAERELRRL YEQAERSRAW
LAASTEITTS VLAAPDPCEA LGRVARMGRR MAAADLSLVA VPDEHGTLVV TAASVAPDLP
ADADALPGLT VTLRAAPGAG VLNAGHAVVL DGLQLRGNRV VHAPTLPLAA ALAVPLRIAG
HQAAILLLAH RSSTARLPAR DIELVEGFAA DAALALELAQ AHQERARLAV FEDRDRIARD
LHDLVLQRLF AIGLHLQSLA RAAGDMIGAR LTAAIDALDQ TIEEIRRTIL QVQPS
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