Gene Franean1_4568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4568 
Symbol 
ID5672915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5450729 
End bp5451703 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID641243431 
Productalcohol dehydrogenase 
Protein accessionYP_001508847 
Protein GI158316339 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.415318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.887184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCCG CCCGCGTCGA GGCGTACGGC GGTCCGGCCG ACGTCGTCAT CCGCGACGTA 
CCCGCTCCGG AGGCGACGCC GGGCCACGTC GTCGTCGATG TGGCCGCGGC CGCGCTGAAT
TTCCCCGACC TGCTGTTGAT CGCGGACCGC TACCAGGTGT CGGCGCCGCT GCCCTTCACT
CCCGGGTCCG AGTTCGCCGG CCGGGTGGCG GCGGTCGGTG ACGGGGTCAC CGGTCTCGCC
GTCGGTGACC CTGTCCATGG CTCGGTCTTC TCCGGCGCGA TGGCCGAGCA GGTGCTGGCG
CCCACGACCG CGGTCTCGCC GATCCCGGCC GGGCTGTCGA TGGTCGAGGC TGCGGCGTTC
CGGGTGACGT ACCTGACGGC GTACCACTGC CTGGTCACGA TCGGAGAGCT GGCGCCGGAC
CAGTGGGTCG TCGTCCTGGG GGCCGCCGGA GGCGTCGGCT CCGCGGCGGT CGACATCGCT
GTCAGGCTCG GTGCGCGCGT CATCGCCGCG GCCTCGTCAC CCGAGCGGCT GGCGGTCTGC
AAGGAGCTCG GTGCCGAAAC GTGCATCGAC TACACGACGG AAGACCTCAA GCTCCGGATC
AAGGAGATCA CGGGCGGCGG CGCCGACCTC GTCGTCGACC CGGTCGGCGA CCGGTGGGCC
GAGCCGGCGC TGCGCGCGAT CCGCTGGGGT GGCCGCTTCG TCGTCGTGGG CTTCGCAGGC
GGTGAGATCC CGCGGATCCC GCTGAACCTC GTGCTGCTGA AGAACATCAC GGTGCGCGGG
ATCGAGCTGC GTACATGGTC CGTGCGGCTG CCTGAGGAGA CGGCGCGGGC GCGCGAGGGG
CTGGCGACAC TGGTGGCGCA GGGGATGCGG CCGCTCGTGT CCGAGGTACA CGACCTCGAC
GACGTGGCCG TCGCCCTGCA GCGCGTCGCC GACCGGGCGC CGACCGCCAA AGTCGTCATC
CGCGTCGCGG ACTGA
 
Protein sequence
MRAARVEAYG GPADVVIRDV PAPEATPGHV VVDVAAAALN FPDLLLIADR YQVSAPLPFT 
PGSEFAGRVA AVGDGVTGLA VGDPVHGSVF SGAMAEQVLA PTTAVSPIPA GLSMVEAAAF
RVTYLTAYHC LVTIGELAPD QWVVVLGAAG GVGSAAVDIA VRLGARVIAA ASSPERLAVC
KELGAETCID YTTEDLKLRI KEITGGGADL VVDPVGDRWA EPALRAIRWG GRFVVVGFAG
GEIPRIPLNL VLLKNITVRG IELRTWSVRL PEETARAREG LATLVAQGMR PLVSEVHDLD
DVAVALQRVA DRAPTAKVVI RVAD