Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4530 |
Symbol | |
ID | 5672879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5404738 |
End bp | 5405487 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641243395 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001508811 |
Protein GI | 158316303 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTGA CAGTCACAGC TGTCTCGGTC GGTCGCGTCT TCGGCCTCCA GAAGGCCGCG CTCACCTACC TCCGGGGCTG GGGCGAGACC CTGGACATCC CGCTGATCAT GTTCGTGATC CAGGGTGGCG CCACTCCGGT GATCGTCGAC ACCGGGGCCG ACCTGAGCCG CGCCTGGGAG CACCACCGGA TCAGGATGGA GCAGACGCCC GAGGAGCTGC CCGACGCGGC GGTGCGCGCG CTGGGCATCG ACCCCGATGA GGTGGGCCTG GTCGTCAACA CCCACCTGCA CTGGGACCAC TGCTCGAACA ACCACCTGTT CCCCAATGCC CGAATCGTCC TTCAGCGGCG CGAGATCGAT TTCGCGCGGA GGCCGGTCGA GTGGCATCGG CGCCAGTTCG AGGCCGTGCC CGACCTGATC CCGGCGTGGC TACGCGCCGA GGACCGGATC GACGCGATCG ACGGCGACAC CGACCTGGCG CCGGGGGTCT CGGTGGTCGC CCTGCCCGGT CACACGCCGG GTTCGCAAGG GGTCGTGGTC GAGGCTGAGA CGAACCGCTA CCTGCTCGCG GGTGACTGCG TCGATCTGTA CGAGAACTGG GCGGGCGACG CGGAGGCCGA CCGCATCCCG TCCGGCTTCT TCACCGATCT CGTGGCCTAC GAGGAGAGCG TGCGGCGGAT CGAGCGGTTC GGCTGCGAGG TGATCCCGAG CCACGACCCG CAGGTGGTCG AGCGTCGGGT CTTCCGTTGA
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Protein sequence | MKLTVTAVSV GRVFGLQKAA LTYLRGWGET LDIPLIMFVI QGGATPVIVD TGADLSRAWE HHRIRMEQTP EELPDAAVRA LGIDPDEVGL VVNTHLHWDH CSNNHLFPNA RIVLQRREID FARRPVEWHR RQFEAVPDLI PAWLRAEDRI DAIDGDTDLA PGVSVVALPG HTPGSQGVVV EAETNRYLLA GDCVDLYENW AGDAEADRIP SGFFTDLVAY EESVRRIERF GCEVIPSHDP QVVERRVFR
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