Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4522 |
Symbol | |
ID | 5672871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5394769 |
End bp | 5395758 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243387 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001508803 |
Protein GI | 158316295 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCGA CGCCGGTGTC GACAACAGCC GGAGTGCAGG CCGCAGTGCC GGCCGGGCCG CAGGGCGTCG GCGTGCCGGG CGGCGGCGGC GCGCAGGGCG GTGTGCTGGG CGGCCCCGTG GCGGCCACCG TCACCGGCTC GGATGAGCAG TCGTCCACCA CCGCGGCCCG CAAGCCGCGC CGCCCGATGG ACATCAAGCG GCTGATCGTC CTCATCTCGC GGGTGGTACT CCCGGTCGGG GTGCTGGCAC TCTGGGAGAC CGCGAGCGGG GACCCCGCGA CCGAGTCGGG CGTGCTCATC GACAGTTTCT ACGTCAGCAA GCCGTCCGAG ATCTGGTCGG CGCTGACCGG CTGGGTCGAG GAGGGTGTGC TGCTGGACAG CATCCAGGCG ACCGTCATCG CGACGGTGTA CGGGTTCGCC ATCGGCGCGG TGCTCGGCGT TCTGGTGGGC ATCGTGCTGG GCAGCAGCCC GATGCTCGGC GAGATCTTCC AGCCGTTCAT CGTCGCGCTC AACGCGGTCC CGCGGCTGGC CCTGGTGCCG CTTTTCATCC TGTGGTTCGG ATTCGGCCTG GGTTCCAAGG TGGCGCTGGT CAGCCTCATC GTCTTCTTTC TCGTCTTCTA CAGCACCTAC GAAGGTGTGC GTGACGTCGA ACAGCGCCTT ATCGACGTGC TGAAGGTGAT GAACGCGTCG AGGCTCACCG TGCAGCTGAA AGTTCGGATC CCCTCGGCCG GGACCTGGAT CATCCAGGGC CTGCGGGTCT CGGTGCCCTA CGCGCTCGTC GCGGCGGTCA CCGCCGAAAT CATCGGCGCC AACACCGGCA TCGGTTATCT GATCCAGCGG TCGGCGGGTA ACTTCTACAC CGCCGGCGTC TTCGCGGGCA TCGCGGTTCT TGTGGTGGTC TCCACCATCA TCAACGCGCT CGTGACGCTG CTGGAGAAGC GCCTGCTGCG GTGGAAGCCG CGCAACCTGA CCAACGTCGG AGCACCATGA
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Protein sequence | MNPTPVSTTA GVQAAVPAGP QGVGVPGGGG AQGGVLGGPV AATVTGSDEQ SSTTAARKPR RPMDIKRLIV LISRVVLPVG VLALWETASG DPATESGVLI DSFYVSKPSE IWSALTGWVE EGVLLDSIQA TVIATVYGFA IGAVLGVLVG IVLGSSPMLG EIFQPFIVAL NAVPRLALVP LFILWFGFGL GSKVALVSLI VFFLVFYSTY EGVRDVEQRL IDVLKVMNAS RLTVQLKVRI PSAGTWIIQG LRVSVPYALV AAVTAEIIGA NTGIGYLIQR SAGNFYTAGV FAGIAVLVVV STIINALVTL LEKRLLRWKP RNLTNVGAP
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