Gene Franean1_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4488 
Symbol 
ID5672838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5355316 
End bp5356188 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID641243355 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508771 
Protein GI158316263 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG ACGCGCCGAT CGCGATCAGC CGGCAGGACG GCATCGCGAC CATCACGCTC 
AACTGCCCGG AGCGCCGCAA CTCGCTCGGC CGCGAGGCGG TGGTCGTGCT GCACCGCACG
ATCGACGAGG CTGACCGGGA CGACGAGGTA CGGGCGATCG TCATCACCGG GGCGGGCTCG
GCCTTCTCGG TGGGCGCCGA CCTGTCCGGT GGTGCGGAGA CGTTCCAGAC CCCGACGCGC
ACCGAGCAGG CCCCCCACGA CGACCGCGGA CAGGGATCCC TCGACGACCG CGACCTCGGC
GGCTGGCTCG CCCTACGGAT CTTCGAGTGC GGAAAGCCCG TCATCGCCGC CGTCAACGGG
GTGGCCGCCG GCCTGGGCGC GACGATGCTG CTGCCGATGG ACGTCCGGAT CGCCGTGGAC
ACCGCGAGGT TCGGGTTCGT CTTCGCGCGG CGCGGGATCA TCCCGGAGGC CTGCTCCACC
TGGTTCCTTC CTCGGGTCGT CGGCATCAGC AGGGCGATGG ACTGGATGAC CAGCGGACGG
ATCGTCGATG CCGCCGAGGC GGTCGAGAGC GGGCTGATCC GCAGCCTGCA CTCCCCCGAC
GACCTGCTCC CCGCCGCGTA CGCCGCCGCC AGGGCCATGA CCGAGCAGTC CGCGCCGGTG
TCGGTGGCGC TCGTCCGGCG GCTGCTGTGG GACGGGCTGA CCGTGGGACA TCCCCGCGAC
GTCCACCCCG TGGAGTCCAG CCTGATCCGC GCCCTCGCGT CACATCCGGA CGCCCACGAG
GGAATCCGGT CGTTCATCGA GAAGCGGTCA CCGCGCTTCG TCGGTCGCCC GGGGGCCGAG
ACGCGCACTC TGCTGGATGA CGCCCGGGCC TGA
 
Protein sequence
MAKDAPIAIS RQDGIATITL NCPERRNSLG REAVVVLHRT IDEADRDDEV RAIVITGAGS 
AFSVGADLSG GAETFQTPTR TEQAPHDDRG QGSLDDRDLG GWLALRIFEC GKPVIAAVNG
VAAGLGATML LPMDVRIAVD TARFGFVFAR RGIIPEACST WFLPRVVGIS RAMDWMTSGR
IVDAAEAVES GLIRSLHSPD DLLPAAYAAA RAMTEQSAPV SVALVRRLLW DGLTVGHPRD
VHPVESSLIR ALASHPDAHE GIRSFIEKRS PRFVGRPGAE TRTLLDDARA