| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4467 |
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| Symbol | |
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| ID | 5672818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5332965 |
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| End bp | 5334365 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243335 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001508751 |
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| Protein GI | 158316243 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGGC CGGCGGATTG GACGCAGACG GTCACGGGGC GGGCGGGGAT GTGCTCGCCG
GGGCGGCCGC CGGTGGCGCG GTGGGAGCAT CAGCAGCGGT TCTGGGCCGC GGTCGCGCGT
GGGCTGAGCA GCGAGGATGC CGGTGTCGCG GCCGGCGTGT CGCCGGCGGT CGGGACCCGG
TGGTTCCGCA ACTGTGGCGG GATGCCCCCT TCGGACTTCC CCGCCCCGTC GGGCCGATAC
CTGTCGTTCG CGGAGCGGGA GGAGATCGCC CTGGGTCGTG CCCGCGGGGA CAGCATCCGC
CGGATCGCGC GGGGTTTGGG CCGGCCTGCG TCGACGGTGT CACGGGAGCT GCGGCGGAAC
GCCGGTACCC GCGGCGGGAC CCTGGTCTAC CGGGCCACGC TCGCGCAGTG GCATCGAGAC
CGTCGGGCTG CCCGGCCCAA GACTGCCAAG CTCGCAGGCA ACGAGCGGCT GCGTGGCTAT
GTGCAGGACC GGCTCGCCGG GCCGGTCCTG CGCGGCGACG GCACGGTGGT GCCCGGCCCG
TGGACGGCGC CGTTCACCGG CAGGAACAAG CCGCACCGCC AGGACCGCCG TTGGGCCAGC
GCGTGGAGCC CGGAGCAGAT CTCGCGGCGG CTGCGGGTCG ATTTTCCCGA CGACCCGGCG
ATGCGGATCT CGCATGAGGC GATCTACCAG GCCCTGTACA TCGAGAGGCG GGGGGCGTTG
CGCCGTGAGC TGGTCGCGTG CCTGCGTACG GGCCGCGCCC TGCGGGTGCC ACGCGCGCGG
GCCGGACGCC GCCCCGACGG CATGGTCACC CCCGAGGTGC GGATCGGAGC CCGGCCTGTT
GAGGCCACAG ACCGGGCGGT CGCGGGGCAC TGGGAAGGCG ACCTGATCAT CGGGTTGAAC
CGGTCCGCGA TCGGCACGCT GGTCGAGCGC ACCACCCGGC TCACGGTCCT GCTGCACCTG
CCCCGCATGG ACGGCTACGG CCATGAACCA CGGGTGAAGA ACGGTCCGGC GTTGGCAGGC
CGCGGCGCCG ACGCTGTCCG GGACGCGATC ACACGAGCGT TCGCGGAGCT GCCCGAGCAG
CTACGGCGGA CCCTGACCTG GGACCGCGGC AAGGAGATGG CCGGACACGC CGCGCTGACC
GCCGACACGG GCCTGGGGGT CTACTTCGCC GACCCGCACA GCCCCTGGCA GCGCGGCACG
AACGAGAACA CCAACGGGCT GCTACGCCAG TACTTCCCCA AGGGCACCGA CCTGTCCCGC
TGGACCCGCC ACGAACTCGC CACCATCGCC GCGACCCTCA ACGACCGGCC CCGCAAGACC
CTCGACTGGA AGACCCCCAC CGAAGCGATG AACAACCAGC TACTCTCACT TCAACAACCC
GGTGTTGCGA GGACCGGTTG A
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| Protein sequence | MGRPADWTQT VTGRAGMCSP GRPPVARWEH QQRFWAAVAR GLSSEDAGVA AGVSPAVGTR
WFRNCGGMPP SDFPAPSGRY LSFAEREEIA LGRARGDSIR RIARGLGRPA STVSRELRRN
AGTRGGTLVY RATLAQWHRD RRAARPKTAK LAGNERLRGY VQDRLAGPVL RGDGTVVPGP
WTAPFTGRNK PHRQDRRWAS AWSPEQISRR LRVDFPDDPA MRISHEAIYQ ALYIERRGAL
RRELVACLRT GRALRVPRAR AGRRPDGMVT PEVRIGARPV EATDRAVAGH WEGDLIIGLN
RSAIGTLVER TTRLTVLLHL PRMDGYGHEP RVKNGPALAG RGADAVRDAI TRAFAELPEQ
LRRTLTWDRG KEMAGHAALT ADTGLGVYFA DPHSPWQRGT NENTNGLLRQ YFPKGTDLSR
WTRHELATIA ATLNDRPRKT LDWKTPTEAM NNQLLSLQQP GVARTG
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